Gene Information

Name : lolD (SMWW4_v1c20210)
Accession : YP_007405841.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Resistance
Product : outer membrane-specific lipoprotein transporter subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2197666 - 2198370 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAACCATCTTTTGCTGCAGTGTGACAACCTGTGCAAGACCTATCAGGAAGGCAACCTGCACACCGACGTGCTGCG
CAACGTCAGCTTTGCCATGCAGCAGGGCGAGATGATGGCGATCGTCGGCAGCTCGGGTTCCGGCAAGAGCACCCTATTGC
ACCTGCTGGGCGGGCTGGACTCGCCGACCTCCGGCGAGGTGATCTTCAAGGGCGAATCGCTGAACGCCATGTCTTCGGCG
GCCAAGGCCGAGCTGCGCAACCGCCAGCTGGGCTTCATCTATCAGTTCCACCATCTGTTGCCGGACTTCACCGCGCTGGA
AAACGCCGCCATGCCGCTCTTGATCGGCGGCGCCAAGCCGGCTCAGGCGCAGGAGAAGGCGCGGGAGATGCTGGCGGCGG
TCGGGCTGGAAAAACGCAGCAAGCACCGCCCGTCCGAGCTCTCCGGCGGCGAACGTCAGCGCGTGGCGATCGCGCGCGCG
TTGGTCAACAACCCGGCGTTGGTGCTGGCGGACGAACCGACCGGTAACCTGGATAAACGCACCGCGGACAGCATCTTCGA
TCTGCTGGGCGAGCTGAACGTGCGCCAGGGCACCGCTTTCCTGGTGGTGACACACGATCTGCAGCTGGCCAAGCGCCTGA
GCCGCCAGCTGGAAATGGCCGACGGCCACCTGCAGGCGCAGCTGACCCTGATGGGGGCCGAGTAA

Protein sequence : 
MSNHLLLQCDNLCKTYQEGNLHTDVLRNVSFAMQQGEMMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIFKGESLNAMSSA
AKAELRNRQLGFIYQFHHLLPDFTALENAAMPLLIGGAKPAQAQEKAREMLAAVGLEKRSKHRPSELSGGERQRVAIARA
LVNNPALVLADEPTGNLDKRTADSIFDLLGELNVRQGTAFLVVTHDLQLAKRLSRQLEMADGHLQAQLTLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_007405841.1 outer membrane-specific lipoprotein transporter subunit NC_008702.1.4606598. Protein 1e-38 47
lolD YP_007405841.1 outer membrane-specific lipoprotein transporter subunit NC_012469.1.7686878. Protein 1e-40 44