Gene Information

Name : vasG (SMWW4_v1c30290)
Accession : YP_007406842.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : type VI secretion system protein VasG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3267142 - 3269799 bp
Length : 2658 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAAATCAGCCGCTCGGTATTATTTGGCAAACTGGATAGCCTGTTATTCACCTCTCTGGAAAGTGCGACGGCGTT
TTGCAAGCTGCGCGGTAACCCCTACGTCGAATTGGCGCACTGGCTGCATCAGCTGATGCAATCGCCGGACGGCGATCTGC
AGCAGATCGTCCGCCACTTCGCGTTGGACGAGGCGCAGCTGGCGCGCGACATCGTCGAGGCGCTCGATCGCCTGCCGCGC
GGCGCCAGCGCCATCTCCGATCTGTCCGAGCACATCGACAGCGCGGTAGAACGCGCCTGGGTCTATGGCTCATTGAAATT
CGGCGCGGCGCGCATCCGCGGCGGCCACCTGCTGCTCGGCATTCTGAAAACCTACAGCCTGCGCCATCTGCTGAAGGCCA
TTTCCCCGCAGTTCGAGCGCATCAACGCCGATCTGTTGATGGAGCAGTTCGCCGTCATTACCGCTCACTCGGCGGAAAAC
GCCCAGGATGCGCCGGCGGAAAGCCGCGCCGAGAACGCATCCGGCGCGGCGCGCAGCGGTGAAAGCGTGCTGGCGCAGTA
TGCCCAGGATCTGACCGCCAGAGCGCGCGACGGCGAGATCGACCCGGTGGCCGGCCGCGATGAAGAGATCCGGCAAATCA
TCGATATCCTGATGCGCCGCCGCCAGAACAACCCGCTGCTGACCGGTGAGGCCGGCGTCGGGAAAACCGCGGTGGTGGAA
GGCCTGGCGCTGCGCATCGTGGCCGGCGATGTGCCACCACAGCTGCGCGACGTGAAACTGTGCCTGCTGGACATCGGCAT
GCTGCAGGCCGGCGCCGGCGTTAAGGGCGAGTTTGAAAAACGGCTGCAGGCGGTGATCGACGAAGTGCAGTCCAGCCCGA
CGCCAATCATCCTGTTTATCGACGAAATTCACACCCTGATCGGCGCCGGCGGCGCCCAGGGCACCGGCGACGCCGCCAAC
CTGCTGAAGCCGGCGCTGGCGCGCGGCCAACTGCGCACCATTGGCGCCACCACCTGGTCGGAATACAAGAAATACATCGA
GAAAGACCCGGCGCTCACCCGCCGTTTCCAGGTGGTGCAGGTGCACGAACCGAGCGAAGACAAAGCGCTGCTGATGCTGC
GCAGCACCGTCAGCCCGCTGGAGCAACACCACCGCGTGCTGCTGCTGGATGAAGCGGTGGACGCCGCGGTGCGGCTGTCC
CATCGCTATATTCCGGCCCGCCAGTTGCCGGACAAGGCGGTGGCGCTGCTGGATACCGCCTGCGCGCGCGTGGCGGTCAG
CCAACACGCCGAACCCGCCCAGGTTGAAGACTGCCGCCATCGCATCGATGCGCTGCAGATCGAATTGGATATCGCCCGCC
GCGAGGCCAAGGTCGGCATCGGCGATCCCCTGCGCCCGCAGGAGATTGAAGCTCAGCTGACCGCGCTGCGCCTGGAGCTC
AAACAGCTGACCGAGCGCTGGCAGCAAGAGCTGACGCTGATCCAAGAGATCATCACACTGCGCGCCCAGCTGCACCGGCA
GGAAGCGGAGGAGCCTGCCGGCGAAGAAACGGAGGCGGGCCCTGACGCCGACGCGCTGCGCGCCCAACTGGGCGAGCTGC
AGCAGCAACTGAGCGCGCTGCAGGGCGAAGCGCCGCTGATCTTCGCCGCCGTCGACGCCAACATCGTGGCGGCGGTGGTG
GCCGACTGGACCGGCATCCCGCTGGGCCGCATGGTGAAAAACGAGATTGAAGCGGTGCTGCAACTCTCCGCCACCCTGAA
CCAGCGCGTCATCGGCCAACGCCATGCGCTGGATCTGATCGCCCGCCGGGTGCGCACCTCACGGGCGCGGCTGGACGATC
CGAACAAGCCGGTCGGGGTGTTCCTGCTGGCCGGGCCCTCCGGCGTCGGCAAAACCGAAACCGCGCTGGCGCTGGCGGAA
ACCCTGTATGGCGGCGAGCAGAACGTCATCACCATCAACATGAGCGAATTCCAGGAGTCGCACACCGTTTCGACGCTGAA
AGGCGCGCCGCCCGGCTATGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCGGTGCGCCGCCGTCCTTACAGCGTGG
TGCTGTTGGACGAGATCGAGAAAGCGCACCCGGACGTCCATGAAATCTTCTTCCAGGTGTTCGACAAGGGCTGGATGGAG
GACGGCGAAGGCCGCCATATCGATTTCCGCAACACCATCATCATCCTGACCTCCAACGTCGGCACCGATCTGATCGCCGG
GCTGTGCAGCGATCCGGAGCTGCTGCCGGAGCCGGAGGCGCTGAGCGGCGCGCTGCGCCAACCGCTGCTGTCGGTGTTCC
CGGCCGCCTTGCTCGGCCGCCTGCTGGTGGTGCCGTATTACCCGCTGACCGACGCCACGCTGGGCAACATCGTGCGCCTG
CAGTTGGGCCGCATTCAGCGCCGTCTGGCGGAGAATCACGACATCGTCTGCACCTTCGACGACGCGGTTATCGAGCAGAT
CGTCAGCCGCTGCACCGAGGTGGAGTCCGGCGGCCGCATGGTCGACGCCATCCTGACCAACACCCTGCTGCCGCAGATCA
GCCACACCCTGCTGACCGGCAGCGCCAACGACCAGCGCTATCGCCAGCTGCATATCGCGCTGCAGAACCACGAATTCATT
TGTCAATTTCAGGCATAA

Protein sequence :
MSEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQSPDGDLQQIVRHFALDEAQLARDIVEALDRLPR
GASAISDLSEHIDSAVERAWVYGSLKFGAARIRGGHLLLGILKTYSLRHLLKAISPQFERINADLLMEQFAVITAHSAEN
AQDAPAESRAENASGAARSGESVLAQYAQDLTARARDGEIDPVAGRDEEIRQIIDILMRRRQNNPLLTGEAGVGKTAVVE
GLALRIVAGDVPPQLRDVKLCLLDIGMLQAGAGVKGEFEKRLQAVIDEVQSSPTPIILFIDEIHTLIGAGGAQGTGDAAN
LLKPALARGQLRTIGATTWSEYKKYIEKDPALTRRFQVVQVHEPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLS
HRYIPARQLPDKAVALLDTACARVAVSQHAEPAQVEDCRHRIDALQIELDIARREAKVGIGDPLRPQEIEAQLTALRLEL
KQLTERWQQELTLIQEIITLRAQLHRQEAEEPAGEETEAGPDADALRAQLGELQQQLSALQGEAPLIFAAVDANIVAAVV
ADWTGIPLGRMVKNEIEAVLQLSATLNQRVIGQRHALDLIARRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALALAE
TLYGGEQNVITINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWME
DGEGRHIDFRNTIIILTSNVGTDLIAGLCSDPELLPEPEALSGALRQPLLSVFPAALLGRLLVVPYYPLTDATLGNIVRL
QLGRIQRRLAENHDIVCTFDDAVIEQIVSRCTEVESGGRMVDAILTNTLLPQISHTLLTGSANDQRYRQLHIALQNHEFI
CQFQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vasG YP_007406842.1 type VI secretion system protein VasG VFG2076 Protein 0.0 63
vasG YP_007406842.1 type VI secretion system protein VasG VFG2084 Protein 2e-143 45