Gene Information

Name : tssB (SMWW4_v1c31600)
Accession : YP_007406973.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : type VI secretion protein, TssB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3408890 - 3409447 bp
Length : 558 bp
Strand : -
Note : -

DNA sequence :
ATGGCTAAGGACTCAAGCTCTCAGAAATTTATCGGTAAAAATAACGCGCCGCGCGTGCAAATTGAATATGACGTAGAGCT
TTACGGTTCACAAAAGAAAGTGGAGTTGCCCTTTGTTACGGGGGTCATGTCCGATCTCTCTGGGCATCGGAAAAAGCCTT
TGCTGCCGATCGAAGAGCGGAAATTCCTGACCTTTGATCAGGACAACTTCAACGATCGCATGCGCGCCATCAAGCCTCGT
CTGCAATTTTACGTAGAGAACACCCTGAGCGAAGACGATGCGTTGCTGGACGTGGAATTGGAGTTTGAATCGATGGATGA
CTTCACGCCTGGCGCCATCGCCAAACGGGTTCCGCAGATGCAACGCCTGCTTGAAGCCCGGGAGCATCTCACGGAGCTGA
TCACCTATATGGATGGTAAATCCAGCGCGGAAGAAGTGGTGAAGAATCTGCTGGAGAAACCCGATTTTCTGCATCGTTTG
GTGACGGATGCGCGTAAAACGGTCGCGGATGCGGAACAGGATGTGCAGGATCCCGGCAATAAAGGAGATGAGGAATGA

Protein sequence :
MAKDSSSQKFIGKNNAPRVQIEYDVELYGSQKKVELPFVTGVMSDLSGHRKKPLLPIEERKFLTFDQDNFNDRMRAIKPR
LQFYVENTLSEDDALLDVELEFESMDDFTPGAIAKRVPQMQRLLEAREHLTELITYMDGKSSAEEVVKNLLEKPDFLHRL
VTDARKTVADAEQDVQDPGNKGDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-45 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tssB YP_007406973.1 type VI secretion protein, TssB family VFG2069 Protein 3e-45 51