Gene Information

Name : ybiS (SMWW4_v1c05400)
Accession : YP_007404366.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Unknown
Product : L,D-transpeptidase linking Lpp to murein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 614372 - 615292 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATGAGCATTCGCGCGTTATTAACCCTGTTTACGGCACTGGTTGCATTCAGCCAGGCTGCCTTCGCCGTCGTTTA
CCCGCTGCCGCCAAAAGACAGCCGTTTGGTGGGCGAGAATATCCAAATCACCGTACCGGAAGACAGCAAACTGCCGCTGG
AGAGCTTCGCCGCCCAGTATCAGATGGGGCTGAGCAACATGCTGGAGGCCAACCCGGGCGTGGATCCGTTCCTGCCGAAG
GCCGGCAGCACCCTGACTATCCCGCAGCAGCTGATCCTGCCGGACGCGCCGCGTGAAGGCATCATCATCAACAGCGCCGA
AATGCGTCTGTACTATTACCCGAAAGGCTCCAACACCGTGGTGGTGCTGCCGATCGGCATCGGCCAGCTGGGTAAAGACA
CCCCGCTGAACTGGACCACCACCGTGCAGCGCAAGAAAGACGGCCCAACCTGGACGCCGACCGCCAAAATGCGCGCCGAA
TACGCGGCTGACGGCGAGATCCTGCCTGCGGTGTTCCCGGCCGGCCCGGATAACCCGATGGGGCTGTATGCGCTGTATGT
CGGCCGTCTGTATGCCATTCACGGCACCAACGCCAACTTCGGCATCGGCCTGCGTGTGAGCCACGGCTGCGTGCGTCTGC
GCGCCGACGACATCAAGTACCTGTTCCAGAACGTGCCGGTCGGCACCCGCGTGCAGTTCATCAACGAACCGATGAAGGCC
ACCGTCGAACCGGACGGCTCGCGCTACGTGGAAGTGCACAACCCGCTGTCGGCCAACGAAGAGCAGTTGCAATCCAAGGA
TCCGGTGCCGTTGACCATCTCTGCGCCGGTCGGCAAAGTGCTGATGGACGCCGGCGTCAACCAGAGCGAAGTGGACGCGG
CGATCAAGGCCCGTTCCGGCATGCCGGTGAAAGTGAACTGA

Protein sequence :
MKMSIRALLTLFTALVAFSQAAFAVVYPLPPKDSRLVGENIQITVPEDSKLPLESFAAQYQMGLSNMLEANPGVDPFLPK
AGSTLTIPQQLILPDAPREGIIINSAEMRLYYYPKGSNTVVVLPIGIGQLGKDTPLNWTTTVQRKKDGPTWTPTAKMRAE
YAADGEILPAVFPAGPDNPMGLYALYVGRLYAIHGTNANFGIGLRVSHGCVRLRADDIKYLFQNVPVGTRVQFINEPMKA
TVEPDGSRYVEVHNPLSANEEQLQSKDPVPLTISAPVGKVLMDAGVNQSEVDAAIKARSGMPVKVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-91 64