Gene Information

Name : CSSP291_10540 (CSSP291_10540)
Accession : YP_007440982.1
Strain : Cronobacter sakazakii Sp291
Genome accession: NC_020260
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2189222 - 2189926 bp
Length : 705 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGTAATTCTGTGCTGTTACAGTGCGACAACCTGTGCAAACGCTACCAGGAAGGCAAAGTGCAAACGGATGTGTTGCA
CAACGTCAGCTTCAGCATCGACGCGGGCGAAATGATGGCGATTGTCGGCAGCTCCGGCTCCGGTAAAAGTACGCTGTTGC
ACCTGCTGGGCGGGCTGGATACGCCTACCTCCGGCGACGTAATTTTCAGCGGCCGGGCGCTGAGTACGCTCTCTTCTTCC
GCCAAAGCGGAGCTGCGTAACCGCGAGCTCGGTTTTATTTACCAGTTCCACCATCTGCTTCCCGATTTCACCGCGATGGA
AAACGTGGCGATGCCGCTGCTTATCGGCAAAGCGCCGAAGGCCGAGACCGAGCGCCGGGCGCTCGCGATGCTGGACGCCG
TGGGGCTCGCGCACCGCAGCAGCCACCGTCCGTCTGAGCTTTCCGGCGGCGAGCGCCAGCGTGTCGCGATTGCCCGTGCG
CTGGTGAATAATCCGCGTCTGGTGCTGGCGGATGAACCGACCGGTAACCTTGATGCCCGCAACGCCGACAGCATTTTCGA
CCTGCTCGGCGAGCTGAATAAAACCCAGGGCACCGCCTTTCTGGTGGTGACGCACGATCTGCTACTGGCGAAACGGCTGT
CGCGCCAGCTGGAGATGCGCGACGGGCACCTGAACCCTGAGCTGACCCTGATGGGGAGGGCGTAA

Protein sequence : 
MSNSVLLQCDNLCKRYQEGKVQTDVLHNVSFSIDAGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFSGRALSTLSSS
AKAELRNRELGFIYQFHHLLPDFTAMENVAMPLLIGKAPKAETERRALAMLDAVGLAHRSSHRPSELSGGERQRVAIARA
LVNNPRLVLADEPTGNLDARNADSIFDLLGELNKTQGTAFLVVTHDLLLAKRLSRQLEMRDGHLNPELTLMGRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSSP291_10540 YP_007440982.1 lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 1e-36 49
CSSP291_10540 YP_007440982.1 lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 2e-40 44
CSSP291_10540 YP_007440982.1 lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686946. Protein 7e-23 41