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Name : secD (CSSP291_13770) Accession : YP_007441622.1 Strain : Cronobacter sakazakii Sp291 Genome accession: NC_020260 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2886819 - 2888666 bp Length : 1848 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACCTCATGCTGGTCGCCGTGCTTATCGTCGGCCTGCTTTATGCACTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAATACGTTACAAAAAGAAAAAATTTCCGCGAAATCTGTGGCTCTGGAAGAGGGCGCAATTCTTGCGCGCTTTGACTCC ACCGATACTCAGCTGCGCGCTCGTGAAGCGCTGATGAGCACGATGGGCGATCAATTCGTCGTCGCGCTTAACCTCGCGCC TGCCACCCCACGCTGGCTTACCGCTATTTCCGCCGAACCGATGAAGCTGGGCCTCGACCTGCGCGGCGGCGTTCACTTCC TGATGGAAGTGGATATGGACACCGCGCTTGGCAAGCTCCAGGAACAGAATATGGACAGCCTGCGCAGCGATCTGCGCGAG AAAGGGCTGAGCTGGACGAACGTGCGTAAAGCCGATAACTACGGCGTGACGATTCAGTTCCGTGACAGCGATATCCGTGA CGCCGCGGTCTCTTACCTGACGAGCCGCCACCGCGACATGGTTATCTCAAGCCAGGGCGATAACAGCCTGCGCGCGGTGA TGTCTGATGAGCGTCTGCGCGAAGCGCGTGAATACGCTGTTCAGCAGAACATTAATATCCTGCGTAACCGCGTGAACCAG CTGGGCGTAGCCGAGCCGCTGGTGCAGCGTCAGGGCGCTGACCGCATCGTGGTCGAGCTGCCGGGTATTCAGGATACCGC TCGCGCGAAAGAAATCCTCGGCGCGACCGCGACCCTGGAATTCCGTCTGGTTAACAGCTCTGTTGACCGTTCTGCCGCCG CGGCAGGCCGTGTTCCAGGCGATTCTGAAGTGAAGATGACCCGTGAAGGCCAGCCGGTTGTGCTGTACAAACGCGTTATC CTGACCGGTGACCATATTACCGATTCCACCTCCGGCGTTGACCAGTACAACATGCCGCAGGTGAATATTTCGCTCGACAG TGCGGGCGGTAATATCATGTCTAATTTCACCAAAGACAACATCCATAAACCGATGGCGACGCTCTTTGTGGAATATAAGG ACAGCGGTAAGAAAGACGCCAACGGCCGCAGCATCCTGGTAAAACAGGAAGAAGTGATCAACGTTGCGACGATTCAGGCG CGTCTGGGTCAGAACTTCGTGATTACCGGCATCGACAACCCGAACGAAGCGCGTCAGCTTTCGCTGCTGCTGCGTGCGGG CGCGCTGATCGCGCCGATTCAGATTGTGGAAGAGCGCACCATCGGCCCGACGCTGGGTATGCAGAACATCACTCAGGGTC TGGAAGCATGTCTGGCGGGCCTCGCGGTCTCCATTCTGTTTATGATTCTGTTCTATAAGAAGTTCGGTCTTATCGCCACT ACGGCGCTGCTGGCAAATCTGGTGCTGATCGTCGGCATCATGTCGCTGCTGCCGGGCGCGACGCTCACCATGCCGGGTAT CGCGGGGATTGTGTTAACCCTTGCGGTCGCGGTGGATGCGAACGTGCTGATAAACGAGCGTATTAAAGAAGAGCTCAGCA ACGGCCGTTCAGTGCAGCAGGCGATTGACGAAGGTTACCGTGGGGCGTTCAGCTCGATTTTCGACGCCAACGTCACGACG CTGATTAAGGTCATTATCCTGTACGCAGTGGGGACCGGCGCGATTAAAGGGTTTGCTATCACGACCGGTATCGGCGTGGC GACCTCCATGTTCACCGCTATTGTCGGTACCCGTGCCATTGTGAACCTGTTGTACGGCGGCAAACGCATCAACAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYLMLVAVLIVGLLYALPNLYGEDPAVQITGARGVAASEQTLIQVQNTLQKEKISAKSVALEEGAILARFDS TDTQLRAREALMSTMGDQFVVALNLAPATPRWLTAISAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNMDSLRSDLRE KGLSWTNVRKADNYGVTIQFRDSDIRDAAVSYLTSRHRDMVISSQGDNSLRAVMSDERLREAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSSVDRSAAAAGRVPGDSEVKMTREGQPVVLYKRVI LTGDHITDSTSGVDQYNMPQVNISLDSAGGNIMSNFTKDNIHKPMATLFVEYKDSGKKDANGRSILVKQEEVINVATIQA RLGQNFVITGIDNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLAGLAVSILFMILFYKKFGLIAT TALLANLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSVQQAIDEGYRGAFSSIFDANVTT LIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-119 | 46 |
