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Name : lysS (CSSP291_02255) Accession : YP_007439338.1 Strain : Cronobacter sakazakii Sp291 Genome accession: NC_020260 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 443674 - 445191 bp Length : 1518 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCTGAACAACAAGCACAAGGCGCAGAAGCGGCGGTCGATCTTAATAACGAACTGAAAACGCGCCGCGAGAAGCTGGC TACGCTTCGCGAACATGGCGTCGCGTTTCCGAACGATTTTCGTCGCGACCATACCTCAGACCAACTGCACACTGACTTCG ATGGTAAAGAAAACGAAGAGCTGGAAGCGCTGAACATCGAGGTCTGCGTGGCAGGCCGTATGATGACCCGTCGCATTATG GGTAAAGCGTCTTTCGTTACGCTGCAGGATGTTGGCGGTCGTATTCAGCTGTATGTGGCGCGTGACGATCTGCCGGAAGG CGTCTACAACGAGCAGTTCAAAAAATGGGACCTCGGCGATATCCTGGGTGCCCGCGGTAAACTGTTTAAAACCAAAACCG GCGAGCTTTCCATTCACTGCACCGAGCTGCGTCTGCTGACCAAAGCGCTGCGCCCGCTGCCGGATAAATTCCACGGTCTG CAGGATCAGGAAGCGCGCTACCGCCAGCGTTACCTCGATCTCATCGCGAACGATGAATCCCGCAAAACCTTTAAAGTGCG TTCGCAGATCCTGGCGGGTATCCGTCAGTTCATGGTTGGCCGCGGCTTTATGGAAGTGGAAACCCCGATGATGCAGGTGA TCCCGGGTGGCGCGTCCGCGCGTCCGTTCGTGACGCACCACAACGCGCTGGATCTCGACATGTATCTGCGTATCGCGCCG GAGCTGTACCTCAAGCGTCTGGTCGTGGGCGGTTTCGAGCGCGTGTTTGAGATCAACCGTAACTTCCGTAATGAAGGCAT CTCTGTACGCCATAACCCTGAGTTCACCATGATGGAACTCTATATGGCGTACGCGGATTACAAAGATCTGATCGAGCTGA CCGAATCCCTGTTCCGTACTCTGGCGCAGGATGTGCTCGGCACCACGCAGGTGCCTTACGGCGAAGAGACGTTTGATTTC GGCAAGCCGTTTGAAAAACTAACCATGCGCGAAGCCATCAAGAAATATCGCCCGGAAACCGATTTGGCGGATCTGGATGA TTTCGAGAAGGCCAAAGGCATTGCGCAGGCAGTCGGCATTAAAGTTGAGAAAAGCTGGGGTCTCGGCCGCGTTGTGACCG AAATCTTCGAAGAAGTGGCCGAAGCGCACCTGATTCAGCCGACCTTCATCACCGAATACCCGGCAGAAGTCTCTCCGCTG GCGCGTCGTAATGATGAAAACCCGGAAATCACTGACCGCTTTGAATTCTTCATCGGCGGCCGCGAAATCGGCAACGGCTT TAGCGAGCTGAACGACGCGGAAGATCAGGCGCAACGCTTCCAGGATCAGGTTGCCGCGAAAGACGCCGGCGATGACGAAG CGATGTTCTACGACGAAGACTACGTCACCGCGCTGGAGCACGGCTTGCCGCCGACGGCGGGTCTCGGCATTGGGATCGAC CGTATGGTGATGCTGTTTACCAACAGCCACACCATACGCGACGTTATCCTGTTCCCGGCGATGCGTCCGGTGAAATAA Protein sequence : MSEQQAQGAEAAVDLNNELKTRREKLATLREHGVAFPNDFRRDHTSDQLHTDFDGKENEELEALNIEVCVAGRMMTRRIM GKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL QDQEARYRQRYLDLIANDESRKTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGEETFDF GKPFEKLTMREAIKKYRPETDLADLDDFEKAKGIAQAVGIKVEKSWGLGRVVTEIFEEVAEAHLIQPTFITEYPAEVSPL ARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-170 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007439338.1 | lysyl-tRNA ligase | VFG1668 | Protein | 7e-171 | 69 |
