Gene Information

Name : Cspa_c03790 (Cspa_c03790)
Accession : YP_007453451.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 437274 - 437972 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTTTAAATGTTACTGATGTAAAAAAGTCATATGGTGAAGGAGATAGCTTAGTACAAGTTCTTAAGGGAGCTAGCTT
TGATTTAGAGAAAGGTAAAATTTGTACGATATTAGGCCCTTCGGGATCTGGTAAATCGACTTTACTGAATATAATCGGAG
GATTAGAAACTATCGATTCTGGAATTATAATAATTGATAATATTAATCTTTCAAATGCATCTCCAAAGGAATTATCAAGT
TTTAGACGAAGCCATCTTGGATTCATATTTCAATTTTATAATCTCGTCCCTAACTTAACTGTTATGGAAAATGTAGAAGT
ATGTGAATATTTAACAAAAAATCCACTAAATAAAGAAAATCTATTTAAAACTTTAGGATTATGGGATCATAGAAACAAAC
TTCCAAAGCATTTATCTGGTGGGCAACAGCAAAGGACAGCTATCGCCAGAGCTCTTATAAAGAATCCAAAACTTTTATTA
TGTGATGAACCCACTGGTGCATTAGATTATAAAACATCCAAAGAAATTCTTCAATTACTAGAGGACGTAAATAAAATATA
TGGTACTACTATTATTATAGTTACACATAATGATGCAATAAAATATATGTCCCATAAAGTAATTAAAGTTAAAGATGGCA
GTATTGAGTCTGTATTTGAAAATTCGAATATACTTCCTGCTTCTCAAATAGAATGGTAA

Protein sequence : 
MFLNVTDVKKSYGEGDSLVQVLKGASFDLEKGKICTILGPSGSGKSTLLNIIGGLETIDSGIIIIDNINLSNASPKELSS
FRRSHLGFIFQFYNLVPNLTVMENVEVCEYLTKNPLNKENLFKTLGLWDHRNKLPKHLSGGQQQRTAIARALIKNPKLLL
CDEPTGALDYKTSKEILQLLEDVNKIYGTTIIIVTHNDAIKYMSHKVIKVKDGSIESVFENSNILPASQIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cspa_c03790 YP_007453451.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-42 48
Cspa_c03790 YP_007453451.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-38 45
Cspa_c03790 YP_007453451.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 7e-39 45
Cspa_c03790 YP_007453451.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 7e-32 41