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Name : CONE_0185 (CONE_0185) Accession : YP_007460668.1 Strain : Candidatus Kinetoplastibacterium oncopeltii TCC290E Genome accession: NC_020299 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : - COG ID : - EC number : 2.7.7.6 Position : 793782 - 797909 bp Length : 4128 bp Strand : - Note : Transcription; SecretomeP prediction: 0.08. DNA sequence : ATGCAACTTCGAGTCGGAGTGTTCATGCCTTATTCGTATACCGAAAAAAAGCGTATTCGTAAAAGTTTTGCTAAGCGTGA AGATGTACAAAAAATCCCATGCCTTCTTGCTACTCAATTGAAATCTTATCAATCATTTTTGCAGGCTGGTGTTAATCCAT CTATGCGTTCTGTTGATGGGTTACAAGCAGCTTTTTTGTCAATTTTCCCAATAATCAGCCATAATGGATCAGCTTTCCTA GAGTTTGTTAGTTATTCTCTAAGTGATCCTATGTTTGATGTAAAAGAGTGTCAGCAGCGTGGTTTATCTTATGCTTCTCC TTTAAGGGCGAAATTACGTTTAGTTCTAATAGATAAAGATTCAAATAAATCTAATGTAAAGGAAGTGAAGGAACAGGAAG TTTATATGGGAGAAATCCCTCTTATGACATCTGCAGGTTCTTTCATTATTAACGGCACTGAGCGGGTTGTGGTTTCTCAA TTACATAGATCCCCCGGAGTATTTTTTGAACATGACAAAGGTAAAACTCACAGCTCAGGAAAATTATTATTTTCAGCTAG AATTATACCCTATCGTGGTTCATGGTTAGATTTTGAGTTTGATCCTAAAGATATATTATTTTTTAGAATAGACCGTAGAA GGAAGATGCCTGTAACAATTTTACTTAAGGCAATTGGTTTCCTAGATGAATTTATACTTTCTTATTTCTTTGATTTTGAT ACTTTTGAGTTAAAAAGCAGTGGTGCTATCTTAGAATTTGTCCCTGAAAGATGGAAGGGTGAAGTTGCTAGCTTTGATAT TGTTGATAAAGAAGGTAATATTATATTAGAAAAGGATAAAAGAATTAGTTCCAGAGGTATAAAACTAATTTCTCAATCTA ATATAAATACAATTACCGTATCGGATGATTTTTTGCTTGGCAGAATTATTGCAGAGAATATTATTGATTCTGAGACTGGC GAGATTTTGATTCGTGCTAATGAGGAGATATCAGAACAAACTTTAGAGACTTTAAGGAATTCTTGTATCGAAAATATTAA GACCTTGTATATAAATGATTTAGATAGAGGTGCTTATATTTCTCAGACTCTTAGAATAGACGAAACTGTTGATCAGATGT CTGCTAGAATAGCCATATATCGTATGATGAGACCAGGTGAGCCTCCCACGGAAGAAGCTGTTGAGTCTTTATTCGATCGG TTATTTTTCAGTGATAATACATATGATTTATCTCGTGTCGGAAGAATGAAGATAAATAGTAGGCTTGGCCGTGAAGATTC AATTGATAAAACTATCTTAACTGGTGAAGATATTCTTGACATTATAAAGTTATTGGTCAATTTGCGCAATGGAAACGGAA ACATAGATGATATAGATCATCTTGGAAATCGTAGAGTTAGATGTGTAGGAGAGCTAACCGAAAATCAATTTAGATCTGGT TTGGTAAGAGTTGAGAGAGCGGTTAAGGAAAGACTAGGCCAAGCAGAGGTTGATAATTTAATGCCTCACGATTTGATAAA TTCTAAACCAATTTCTGCTGCTATAAAAGAATTCTTTGGTTCAAGTCAGTTATCTCAATTTATGGATCAAACGAATCCTT TATCTGAGGTTACACACAAGCGTCGTGTTTCTGCTCTAGGCCCTGGTGGCTTAACAAGAGATAGAGCTGGATTTGAGGTG CGTGATGTCCATCCAACACATTACGGCAGAGTTTGCCCAATAGAAACTCCTGAAGGTCCTAATATTGGTCTTATAAACTC AATGTCTTTATATGCCCGTTTAAATGAATATGGTTTTTTGGAAACTCCATACAGAAAAGTTGTTAGTGGCAAGGTTAGTG ATCAAATTGATTATCTATCAGCTATAGAAGAGAGTAATTATGTTATTGCTCAAGCGAATGCTGAATTAGATGATAATGGT GTTTTTATAGATGAACTCGTTGCCTGTAGAGAGTCTGGAGAAACTTTGTTAACAGCTCCAAGCAACGTTCATTATATGGA TGTTGCTCCTTCTCAAATAGTATCTGTTGCTGCTTCCTTAATTCCTTTCTTAGAACATGATGATGCTAATAGGGCCCTCA TGGGTGCAAATATGCAGAGGCAAGCTGTTCCTTGTTTATCTCCAGAAAAACCTATTGTTGGTACTGGCCTTGAACGTATA GTCGCTGTTGATTCCGGAACGATTGTTCAAGCTTTAAGAGGTGGTGTAGTTGATTATGTTGATGCCGAGCGTATAGTTAT CAGAGTTAATGATGCAGAAAATATAGCTGGAGAGGTAGGCGTTGACATATATAATCTAATTAAATATACAAGATCAAATC AAAATACAAATATAAACCAACGTCCTATAGTAAAACTCGGTGATAATGTTGCAAAAGGCGATGTTCTAGCTGACGGTGCC TCAACAGATCTAGGTGAACTAGCTTTAGGTCAGAATATGCTGATTGCATTCATGCCATGGAATGGTTATAACTTTGAAGA TTCTATACTTATTTCTGAAAAAGTTGTTTCTGATGATAGATATACCTCAGTTCATATAGAAGAATTAACTATTGTTGCTA GAGACACTAAGCTTGGTCCAGAAGATATTACTAGAGATATCAGCAATCTTTCTGAAGTTCAATTAAATAGATTAGATGAT TCCGGTATTATCTGTATAGGAGCTGAAGTAGGTCCTGATGACGTTTTAGTTGGTAAGGTGACTCCAAAGGGAGAAACTCA ATTAACACCAGAAGAAAAATTACTTAGAGCTATCTTTGGGGAAAAAGCATCTGATGTAAAAGACACTTCTTTGAGAGTTC CATCTGGTATGAGCGGTACTGTAATAGATGTTAGAGTTTTTACCAGAGAGGGTGTTATAAGAGATAATCGTGCTCAATCT ATTATTGATGATGATCTTAAAAAATATCGTCAAGATCTAAATGATCGTTTACGCATAGTTGAGAAAGATCTATTCGATAG GGTTGAAAAAATATTATTGAATCGTGTGGCTAATGGTGGACCTTTAAAATTATCAAAAGGATCATTGATTACTAAAGATT ATCTTCATTCTCTCGATCATTGGCACTGGTTTGATATTCGTCTTGAATCAGAAGAGTTTGCTAGTATCTTAGAGCAAGCA AAATACTCTCTTGAACAGGAAAGGAAACAGTTCGATTCTTTGTTTGAGGACAAAAGAAAAAAATTAACACAAGGAGATGA GCTACCTCCTGGTGTACTTAAGATGGTAAAGGTATATCTAGCAGTGAAACGCAGATTGCAACCTGGTGATAAAATGGCTG GTAGACATGGTAATAAAGGTGTTGTTTCTAGAATCGTTCCTGTTGAGGATATGCCTTACATGGCAGATGGAACACCAGTT GACATTGTTTTAAATCCTTTAGGTGTCCCGTCTAGGATGAATGTAGGACAAGTTTTAGAGGTTCATTTAGGATGGGCTGC TAAAGGAATAGGATCTCGTATTAGTGATGTCATAAATCTTGAATCAAAACAGCAAGTTTCAAAAATTAGAGATTATTTGT GCAAGATTTATAAATCTAATACTGTTTCTATAGACAGCTTGACAGACAATGAAGTATTGGAACTAGCTAATAACTTAAGG TCAGGTTTACCTGTTGCTACTCCTGTTTTTGATGGTGTAGATGAAAAAGAAATTCAAGAGCTACTAAATATAGCTTATCC AGATAACATTGCTGACAAGATGCAATTGACTAAGTCTAGAGCACAGTCTTGGTTGTTTGACGGTAGAACTGGAGAGAAAT TTGAACGACCTGTTACTGTTGGATATATGTATTATTTAAAATTACATCATTTAGTTGATGATAAGATGCATGCAAGATCA ATAGGTCCTTATTCTTTAGTCACCCAACAGCCTTTAGGTGGTAAAGCACAATTTGGCGGTCAGCGTTTCGGTGAAATGGA GGTTTGGGCTTTGGAAGCTTACGGTGCTGCTTATACATTACAGGAAATGTTGACAGTAAAATCTGATGATATTTCAGGAA GAACTAAGGTTTACGAAAGTATAGTGAAAGGAGATCATTTAATCGAGGCAGGAATGCCTGAATCCTTTAATGTTCTTGTT AAAGAAATTCGTTCTTTAGGTTTGGATATAGATTTGGAGCGTAACTAA Protein sequence : MQLRVGVFMPYSYTEKKRIRKSFAKREDVQKIPCLLATQLKSYQSFLQAGVNPSMRSVDGLQAAFLSIFPIISHNGSAFL EFVSYSLSDPMFDVKECQQRGLSYASPLRAKLRLVLIDKDSNKSNVKEVKEQEVYMGEIPLMTSAGSFIINGTERVVVSQ LHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILFFRIDRRRKMPVTILLKAIGFLDEFILSYFFDFD TFELKSSGAILEFVPERWKGEVASFDIVDKEGNIILEKDKRISSRGIKLISQSNINTITVSDDFLLGRIIAENIIDSETG EILIRANEEISEQTLETLRNSCIENIKTLYINDLDRGAYISQTLRIDETVDQMSARIAIYRMMRPGEPPTEEAVESLFDR LFFSDNTYDLSRVGRMKINSRLGREDSIDKTILTGEDILDIIKLLVNLRNGNGNIDDIDHLGNRRVRCVGELTENQFRSG LVRVERAVKERLGQAEVDNLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRDRAGFEV RDVHPTHYGRVCPIETPEGPNIGLINSMSLYARLNEYGFLETPYRKVVSGKVSDQIDYLSAIEESNYVIAQANAELDDNG VFIDELVACRESGETLLTAPSNVHYMDVAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLSPEKPIVGTGLERI VAVDSGTIVQALRGGVVDYVDAERIVIRVNDAENIAGEVGVDIYNLIKYTRSNQNTNINQRPIVKLGDNVAKGDVLADGA STDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVSDDRYTSVHIEELTIVARDTKLGPEDITRDISNLSEVQLNRLDD SGIICIGAEVGPDDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVRVFTREGVIRDNRAQS IIDDDLKKYRQDLNDRLRIVEKDLFDRVEKILLNRVANGGPLKLSKGSLITKDYLHSLDHWHWFDIRLESEEFASILEQA KYSLEQERKQFDSLFEDKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRIVPVEDMPYMADGTPV DIVLNPLGVPSRMNVGQVLEVHLGWAAKGIGSRISDVINLESKQQVSKIRDYLCKIYKSNTVSIDSLTDNEVLELANNLR SGLPVATPVFDGVDEKEIQELLNIAYPDNIADKMQLTKSRAQSWLFDGRTGEKFERPVTVGYMYYLKLHHLVDDKMHARS IGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDISGRTKVYESIVKGDHLIEAGMPESFNVLV KEIRSLGLDIDLERN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 63 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 80 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 72 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 72 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 66 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 66 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 64 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 64 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 64 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 64 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 64 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 64 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 63 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 63 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 63 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 63 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 63 |
| CONE_0185 | YP_007460668.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 63 |
