Gene Information

Name : UWK_01872 (UWK_01872)
Accession : YP_007468082.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2105718 - 2106446 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGACGAAAAAACAGATAGTTCGCGTAACAGATGTCACCAAAGATTTTGACCTGGGTAAAATAGTAGTCAAGGTACTGAA
GGGGATCGATCTTGAGATAGAAACCGGAAAGTATGTCTCCATCATGGGGCCATCCGGCTCTGGAAAATCCACCCTTTTCA
ATATGATTGGAGGGCTTGATAAACCAACAGAGGGCAAAGTATTTATCGATGAAGTGGATATTGCCCAACTCGATGCCTAT
GAGCTTGCATGGTTGCGCTGTCGTAAAATTGGATATATATTTCAAACATTTAACCTGATTCCAGTAATGACTGCCCTTGA
AAATGTCACCCTCCCTATGACCTTTGCCGGAACCCCCAATGAAGCCGCCACCCAGCGCGGTATGGAACTCCTGATCCAAG
TCGGTCTTGAAGGCAGACACGGACATAAACCTGCCGAGCTCTCCGGTGGTCAGCAGCAGCGTGTGGCAGTGGCAAGGGCC
CTTGCCAATACCCCGTCCATTATTTTAGCCGATGAACCCACAGGAAATCTGGACCTTAAAACTGGTGAGGAAATCATTTC
ACTTTTAAAAGAGATGAGCGACAAGCAGGGAGTCACGGTAATCTCTGCCACCCATGACTATAAAATGCTCAATGTCTCGG
ATCAGGTTATCTGGATTCGTGATGGCCGGGTGGACAAAATCCAGGATCGCGATGAACTTGAAATCAACACTGGAGGAATG
AGCAGCTGA

Protein sequence : 
MTKKQIVRVTDVTKDFDLGKIVVKVLKGIDLEIETGKYVSIMGPSGSGKSTLFNMIGGLDKPTEGKVFIDEVDIAQLDAY
ELAWLRCRKIGYIFQTFNLIPVMTALENVTLPMTFAGTPNEAATQRGMELLIQVGLEGRHGHKPAELSGGQQQRVAVARA
LANTPSIILADEPTGNLDLKTGEEIISLLKEMSDKQGVTVISATHDYKMLNVSDQVIWIRDGRVDKIQDRDELEINTGGM
SS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-19 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_01872 YP_007468082.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 6e-37 47
UWK_01872 YP_007468082.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 7e-31 47
UWK_01872 YP_007468082.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-32 45
UWK_01872 YP_007468082.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-34 43