Gene Information

Name : UWK_00403 (UWK_00403)
Accession : YP_007466641.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Virulence
Product : type I secretion system ABC transporter, HlyB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 482714 - 484858 bp
Length : 2145 bp
Strand : -
Note : PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family

DNA sequence :
ATGACCAAAAACACAAAAAAGGCAAATCTTCAAAGTGGGTTGTTCTGTGTCGCGATTGCGGCAAAACTTCATGGAAACCC
TATTACCATGGAGCAGATAAAACATCACTTTGGCCGAGATACAGGTAAGCTCCAGCTCATAGAGCTGGCTCGAATTTTTC
AGGAGATTGGTTTTAAGGCCAAACCCGTAAGCAAGGATCTTTCCAAAGTGAATCCTGGGCTGTTTCCCATTATTGCAGAG
CGCAAAAGTGGTGATTTTGTTTTGGTGGGTGGAAAAGACGAGCAGGGGGAGAAAGTTCTGGTACAGCAGGTTGGCGAAGC
CAGGGGCAGTTGGGTCAATATTGAGGAATTTCAAAAGGATCTGGGCGGCCAGATCCTTTTGCTGAAAAAACGAACGACAC
AACAACGAAGCAGGCAAGCGTTTGGCCTGGGTTGGTTTGTACAATCTTCTCGCAAATATTGGAGTGTGCTGCGGGATTGC
CTCCTGGCATCTTTTTTTGTGCAGATTTTCGGCCTCCTTTCGCCCCTTATCTTTATGATTGTTATTGATAAGGTGTTAAG
CAATAACAGTCTTTCCACCCTTGATGTCCTGGTTTTTGCCCTGGTTGTCGTTTCCTTTTTTGAAATCGCATTGAACGGCC
TGCGAACCTATCTTATGTCTCATACTGCCAACCGCATTGATCTCATGCTTGGTGTACAGTTATTTAAGCACCTGATGAGT
CTCCCCTTAAGCTATTTTGAGTCAAGGCAGGTGGGCGATACCATTGCCAGGATGAAGGAGCTTGAAAATGTACGCAGCTT
TATTACCGGCTCTGGGCTGATGCTCTTTCTCGATCTGTTTTTTCTGATCGTTTTCCTTTTTGTCATGTATCTCTTCAGCC
CTTTTCTGACCATGCTGGTAATGGTTGCTCTTCCCTTGCTTTTTGGTGCCTCTTTTCTTTTGACTCCTTTGCTGCGTAAC
AAACTTGAAGATCGCTATACAGCGGGATCGGACAAGCAATCGTTTCTGGTGGAAACCCTGGCTGGTATGGAGACCATCAA
GGCAAATGCTGCTGAACCTAAAGTTCGTGAAGAGTGGGAGAAACGTCTGGCAAATCATGTGAAGATCGGTTTTTCAGGAG
GACATCTTTCCAATTTGATCAGCCAAACCACCGGAATAATCAGTAAGATACTTTCTGTTTTGCTTCTCTGGTTTGGTGCC
AAAGAAGTACTGCATGGGAATTTAACGGTTGGTCAGTTTATTGCTTTTAATATGCTCTCGTCCAGGGTTATTGCTCCAAT
CCTTCGCCTTTCCCGAATCTGGAAAGAATTGCAGCAGGTAAATGTTTCAGTGGCTCGTATCGGTGATATTTTTAACACTG
CTCCAGAACCGGGATTTGATCCTTCCAAGGTAAGTTTGCCGGCAATTAAGGGAGATGTACGCTTTGAGGATGTTACTTTC
AGATTCACCCCGGAAGGAACAGAAGTTCTGCAGGATGTTTCGTTTTCAGTAAAAGCCGGTGAGGTCATTGGTATTGTTGG
AACGACCGGTTCCGGAAAAACAACTTTGGTGAAATTACTCCAACGTTTATATGTCCCGGAAAAGGGACGAATATTTATTG
ATGGCGTTGATATTTCCATGGCTGACAGCTCCTGGCTAAGGCGACAGATTGGAGTGGTTATTCAGGACGGGGTACTGTTT
AACCGATCCATCAGAGATAACATAACCCTGAATGTGCCGAATCTGGAGATGGAAGAAGTCATTGCTGCTGCAACGCTTGC
GGGGGTACATGACTTAATTCTTGGACTACCGGAAGGATACGACACTTTAGTGGGGGAGAGAGGGTGTCGGCTCTCCACCG
GACAGCGCCAGCGAATTGCCATCGCCCGCGCCCTTGCTTCGGATCCCGGAATGCTCATCCTGGACGAGGCAACCAGTGGC
CTTGATTATGAGTCGGAGATGCATGTTCAAAAAAATATGCGCAAGATATGTGAGGGACGGACGGTGTTTATTATTGCTCA
CCGGCTCACAACCGTTCGTCGTGCCGATAGAATCATCAGCCTTGAACATGGTCGCATCGTGGAAAATGATACTCCGCAGG
CCTTGCTGAAGGCCGGTGGCAGATTTGCAACACTGCAAAGTATCCATGAGGGGTGTTATGCCTGA

Protein sequence :
MTKNTKKANLQSGLFCVAIAAKLHGNPITMEQIKHHFGRDTGKLQLIELARIFQEIGFKAKPVSKDLSKVNPGLFPIIAE
RKSGDFVLVGGKDEQGEKVLVQQVGEARGSWVNIEEFQKDLGGQILLLKKRTTQQRSRQAFGLGWFVQSSRKYWSVLRDC
LLASFFVQIFGLLSPLIFMIVIDKVLSNNSLSTLDVLVFALVVVSFFEIALNGLRTYLMSHTANRIDLMLGVQLFKHLMS
LPLSYFESRQVGDTIARMKELENVRSFITGSGLMLFLDLFFLIVFLFVMYLFSPFLTMLVMVALPLLFGASFLLTPLLRN
KLEDRYTAGSDKQSFLVETLAGMETIKANAAEPKVREEWEKRLANHVKIGFSGGHLSNLISQTTGIISKILSVLLLWFGA
KEVLHGNLTVGQFIAFNMLSSRVIAPILRLSRIWKELQQVNVSVARIGDIFNTAPEPGFDPSKVSLPAIKGDVRFEDVTF
RFTPEGTEVLQDVSFSVKAGEVIGIVGTTGSGKTTLVKLLQRLYVPEKGRIFIDGVDISMADSSWLRRQIGVVIQDGVLF
NRSIRDNITLNVPNLEMEEVIAAATLAGVHDLILGLPEGYDTLVGERGCRLSTGQRQRIAIARALASDPGMLILDEATSG
LDYESEMHVQKNMRKICEGRTVFIIAHRLTTVRRADRIISLEHGRIVENDTPQALLKAGGRFATLQSIHEGCYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-139 46
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 6e-140 46
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 6e-140 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_00403 YP_007466641.1 type I secretion system ABC transporter, HlyB family VFG0907 Protein 5e-140 46
UWK_00403 YP_007466641.1 type I secretion system ABC transporter, HlyB family VFG1557 Protein 3e-140 46
UWK_00403 YP_007466641.1 type I secretion system ABC transporter, HlyB family VFG1501 Protein 3e-140 46
UWK_00403 YP_007466641.1 type I secretion system ABC transporter, HlyB family VFG0841 Protein 8e-132 44
UWK_00403 YP_007466641.1 type I secretion system ABC transporter, HlyB family VFG1269 Protein 1e-136 44