Gene Information

Name : CFSAN001992_01245 (CFSAN001992_01245)
Accession : YP_007470016.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 230224 - 230508 bp
Length : 285 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGCAACAAGAAGCACTAGGAATGGTAGAAACCAAAGGCTTAACCGCAGCCATAGAGGCCGCTGATGCAATGGTTAAGTC
AGCCAATGTGATGTTAGTGGGCTATGAAAAGATTGGCTCCGGGCTGGTAACCGTCATCGTGCGCGGCGATGTTGGCGCGG
TCAAAGCGGCCACCGATGCAGGTGCCGCAGCCGCACGCAACGTGGGTGAAGTGAAAGCCGTACACGTCATCCCACGCCCT
CACACCGATGTAGAAAAAATCTTACCGAAGGGAATTAGCCAATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRP
HTDVEKILPKGISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_01245 YP_007470016.1 hypothetical protein VFG1596 Protein 1e-13 68
CFSAN001992_01245 YP_007470016.1 hypothetical protein VFG1598 Protein 9e-13 65
CFSAN001992_01245 YP_007470016.1 hypothetical protein VFG1597 Protein 1e-12 63