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Name : CFSAN001992_04500 (CFSAN001992_04500) Accession : YP_007470658.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaQ Function : - COG functional category : - COG ID : - EC number : - Position : 865533 - 866501 bp Length : 969 bp Strand : - Note : COG1886 Flagellar motor switch/type III secretory pathway protein DNA sequence : ATGTTAAGAATAGCGAATGAAGAGCGTCCGTGGGTGGAGATGCTTCCAACGCAAGGCGCTACCATTGGTGAGCTGACATT GAGTATGCAACAATATCCAGTACAGCAAGGGACATTATTTACCATAAATTATCATAATGAGCTGGGTAGGGTGTGGATTG CAGAACAATGCTGGCAGCGCTGGTGTGAAGGGTTAATTGGCACCGCTAATCGATCGGCTATCGATCCTGAATTGCTATAT GGAATAGCTGGATGGGGGCTGGCGCCGTTATTGCAAGCCAGTGATGCTACCCTCTGTCAGAACGAACCGCCAACATCCTG CAGTAATCTACCACATCAGCTAGCGTTGCATATTAAATGGATAGTTGAAGAACATGAGTTCCATAGCATTATTTTTACAT GGCCAACGGGTTTTTTGCGCAATATAGTCGGAGAGCTTTCTGCTGAGCGTCAACAGATTTATCCTGCTCCTCCTATTGTA GTCCCTGTATATTTAGGCTGGTGCCAGCTTACATTAATTGAACTTGAGTCTATCGAAATCGGCATGGGCGTTCGGATTCA TTGCTTTGGCGACATCAGACTCGGTTTTTTTGCTATTCAACTACCAGGGGGGATCTACGCAAGGGTATTGCTGACAGAGG ATAACACGATGAAATTTGACGAATTAGTCCAGGATATCGAAACGCTACTTGCGTCAGGGAGCCCAATGTCAAAGAGTGAC GGAACGTCTTCAGTCGAACTTGAGCAGATACCACAACAGGTGCTCTTTGAGATCGGACGTGCGAGTCTGGAAATTGGACA ATTACGGCAACTTAAAACGGGGGACGTTTTGCCTGTAGGTGGATGTTTTGCGCCAGAGGTGACGATAAGAGTAAATGACC GTATTATTGGGCAAGGTGAGTTGATTGCCTGTGGCAATGAATTTATGGTGCGTATTACACGTTGGTATCTTTGCAAAAAT ACAGCGTAA Protein sequence : MLRIANEERPWVEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQRWCEGLIGTANRSAIDPELLY GIAGWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKWIVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPIV VPVYLGWCQLTLIELESIEIGMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGELIACGNEFMVRITRWYLCKN TA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaQ | NP_456110.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 3e-139 | 99 |
| ssaQ | NP_805089.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-139 | 99 |
| ssaQ | NP_460383.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-139 | 99 |
| ssaQ | YP_216426.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 5e-140 | 99 |
| ssaQ | CAA70540.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-94 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_04500 | YP_007470658.1 | type III secretion system protein SsaQ | VFG0518 | Protein | 1e-139 | 99 |
