Gene Information

Name : dcmb_429 (dcmb_429)
Accession : YP_007483400.1
Strain : Dehalococcoides mccartyi DCMB5
Genome accession: NC_020386
Putative virulence/resistance : Resistance
Product : polar amino acid uptake transporter (PAAT) family, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 433053 - 433814 bp
Length : 762 bp
Strand : -
Note : TC 3.A.1.3

DNA sequence : 
ATGAACAAAAAACATACTTCTGCAGAACAACCCATTATCAAGATTGAAAACGTCCAAAAACATTTTGGGCGGGTTCAGGC
CTTGCGCGGGGTAAGCCTTGAAGTAAAAAAAGGCGAAGTAGTGGTCATTATCGGCCCTTCGGGTTCGGGTAAATCTACCC
TGTTACGCTGTATAAACCGCTTGGAAGAATATGACTCAGGCAAAATAACCGTAGACGGCATTACCCTTGACACCACCGAA
AATATCAATCATGTCCGCCGTGAGGTAGGCATGGTTTTTCAGTCCTTCAACCTGTTTTCCCACCTGAAGGTTATTGACAA
CATAACTTTAGCCCAGTGCCAGGTGAGGAAACGTACCAAAGAGGAAGCCGCGGAGAATGCGGCAGACCTGTTAAAGAAGG
TGGGCATACCGGACAAGGCTCATGCCTTTCCCCTTCAGTTATCAGGCGGCCAGCAGCAGCGGGTAGCCATAGCCAGAGCT
CTGGCCATGAATCCCCAGATAATGCTTTTTGACGAGCCGACTTCCGCCCTTGACCCTGAAATGATAAAAGAGGTTCTGGA
CGTAATGACCACTCTGGCCAAAGAGGGTATGACTATGGTAGTGGTATCTCACGAAATGGGTTTTGCCCGAGCAGCGGCTG
ACAGGGTAATTTTCATGGACGAAGGCCTGATAGTGGAAAGTGCCCCCCCGAATGAATTTTTCACTAACCCCAAACATGAA
AGAACCAAGCTCTTTCTGTCTAAAATCCTGCATAACTCCTAG

Protein sequence : 
MNKKHTSAEQPIIKIENVQKHFGRVQALRGVSLEVKKGEVVVIIGPSGSGKSTLLRCINRLEEYDSGKITVDGITLDTTE
NINHVRREVGMVFQSFNLFSHLKVIDNITLAQCQVRKRTKEEAAENAADLLKKVGIPDKAHAFPLQLSGGQQQRVAIARA
LAMNPQIMLFDEPTSALDPEMIKEVLDVMTTLAKEGMTMVVVSHEMGFARAAADRVIFMDEGLIVESAPPNEFFTNPKHE
RTKLFLSKILHNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dcmb_429 YP_007483400.1 polar amino acid uptake transporter (PAAT) family, ATP-binding protein NC_012469.1.7686878. Protein 2e-28 41
dcmb_429 YP_007483400.1 polar amino acid uptake transporter (PAAT) family, ATP-binding protein NC_012469.1.7685735. Protein 5e-29 41