Gene Information

Name : glcB (BN4_12433)
Accession : YP_007494819.1
Strain : Desulfovibrio piezophilus C1TLV30
Genome accession: NC_020409
Putative virulence/resistance : Unknown
Product : Malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 2597322 - 2599493 bp
Length : 2172 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAAAAGAGTGACCGTCGGAAGATTGGCTATTGCCGGAGAACTCCACGCATTGGTGGAAGAACGGCTGGCACCCGG
AACAGGGATTGCGCCTGAGGTCTTCTGGACCAAATTTGAGTCTGTTCTCGTGGACTTGGCTCCAGAAAACAGGCGACTGC
TGGCCATCCGTGAGGCCATGCAGTCTCAGATAGATGACTGGCATCGAGCGCATCGAGGGGGAGAACATGATGCAGCTGCA
TATAAGAATTTTCTTGAAAAAATAGGCTACCTCGTTCCCGAGGGAGACGATTTTTCCATTACCACCCAGAATATTGACCC
GGAAATCGCCACGATTGCCGGTCCGCAACTCGTGGTTCCGGTGACCAATGCCCGGTATGCATTGAATGCGGCGAATGCTC
GGTGGGGAAGCCTCTATGACGCTCTGTACGGGACAGATGTCATCAGCGAGGATGCTGGTGCCACTCGTGGGGGGGGATAC
AATCCTGTCCGAGGTCGAAAAGTGATGGCGTTCGGCTCGGATTTCTTGGATCGCGCCGTTCCGTTGGCCCAAGGAAGTCA
TGCCGATGCCACGGCCTATACTGTGCGGAGTGGCGTTCTCCGCGTTCTCAGGAACGACGGAACCGAGACCGGCCTGGCGT
GTCCCGATCAGTTTGCCGGGTTTGTCGGGGAAGGCCCCCCCCATGCCATTCTGCTTCGCAATAACGGGTTGCATATTGAT
ATTCGTTTCGATCCCAACCATCCGGTCGGCAAGGATCATCCTGCCGGGGTCAAGGATATAATACTTGAAGCTGCGGTGAC
CTCCATCTGTGATTGTGAGGATTCCATTGCCGCTGTGGATGGAGCGGACAAGGCCTTGGCCTACGGCAACTGGCTTGGCC
TTATCAAGGGGGATTTGACCACCGAAATGACCAAAGGTGACACGACATTTGTACGCCAGCTCGAAACGGATCGGGCCTAC
ACGGCCCCTGATGGCTCGGCTTTGTCGCTCGCAGGCCGTTCGATGCTTCTCATTCGCAATGTCGGGCATTTGATGACGAC
AGATGCTGTGTTGCTGGATGGCGAAGAAGTGCCTGAAGGTATACTGGATGCGATGATGACCGGGTTTGTTTCAATGCACG
AAGCTAAGGGGAATTGTGTCTATGGCAATTCTCCGGCTGGGTCCACTTACATCGTCAAACCGAAGATGCATGGACCGGAA
GAGGTCGCCTTTACCTGCTCCATTCTGACTGCTGTGGAAAATTCTCTTGGTCTGGCTCCCCTGTCGCTCAAGGTCGGCAT
CATGGATGAAGAACGGCGGACCACCGTCAATCTCAAGGAATGCATTCGGGCCGCAAGTGATCGGGTCATTTTCATCAATA
CCGGATTCCTTGACAGGACCGGCGATGAAATACACACCTCAATGGAAGCCGGGCCCATGGTGCGCAAGAATGCCATGAAA
GCACAGCCCTGGATCACGGCCTACGAGGATTGGAATGTCGATACCGGCCTTGCTGCCGGGTTTTCCGGGATTGGGCAGAT
AGGCAAGGGAATGTGGCCCAAGCCGGATATGATGCTGGAGATGGTACAAACCAAAGAGGCACACCCCAATGCAGGGGCCA
ATTGCGCATGGGTGCCTTCGCCGACCGCGGCCACGCTTCATGCCATGCATTACCATCTGGTCGATGTCTTTGCCGTGCAA
AAAAAGTTGGCAGCGGCCGGTCCCCGTGCCAGTCTCGATGCCTTGTTGACCCTGCCATTGCTTGAGGAGACCCTTTCGGC
CGAGGATATCCAGGCCGAACTGGATAACAACGCTCAAGGCATTCTAGGGTATGTCGTCCGGTGGATCGATCAGGGCATAG
GATGTTCCAAGGTTCCTGATATAACTGATGTGGGACTCATGGAAGATCGTGCGACTCTTCGTATCTCAAGCCAATATCTC
GCCAATTGGATGCACCATGGCGTTTGCACGGAAACGCAGGTCATGGAGACCATGAAACGCATGGCCGGAGTGGTGGATCG
CCAGAATGCGGACGACCCCCTGTATACTCCCATGGCCAAGGACTTTGATGCTTCCGTGGCTTTCCAGGCTGCTTGTGATC
TTGTTTTTCAGGGGAGGGAACAGCCGAGCGGTTACACTGAACCCATCCTTCATGCCAGACGGCGGGAATTGAAAGCCAAA
CTCGGTCTTTAA

Protein sequence :
MSKRVTVGRLAIAGELHALVEERLAPGTGIAPEVFWTKFESVLVDLAPENRRLLAIREAMQSQIDDWHRAHRGGEHDAAA
YKNFLEKIGYLVPEGDDFSITTQNIDPEIATIAGPQLVVPVTNARYALNAANARWGSLYDALYGTDVISEDAGATRGGGY
NPVRGRKVMAFGSDFLDRAVPLAQGSHADATAYTVRSGVLRVLRNDGTETGLACPDQFAGFVGEGPPHAILLRNNGLHID
IRFDPNHPVGKDHPAGVKDIILEAAVTSICDCEDSIAAVDGADKALAYGNWLGLIKGDLTTEMTKGDTTFVRQLETDRAY
TAPDGSALSLAGRSMLLIRNVGHLMTTDAVLLDGEEVPEGILDAMMTGFVSMHEAKGNCVYGNSPAGSTYIVKPKMHGPE
EVAFTCSILTAVENSLGLAPLSLKVGIMDEERRTTVNLKECIRAASDRVIFINTGFLDRTGDEIHTSMEAGPMVRKNAMK
AQPWITAYEDWNVDTGLAAGFSGIGQIGKGMWPKPDMMLEMVQTKEAHPNAGANCAWVPSPTAATLHAMHYHLVDVFAVQ
KKLAAAGPRASLDALLTLPLLEETLSAEDIQAELDNNAQGILGYVVRWIDQGIGCSKVPDITDVGLMEDRATLRISSQYL
ANWMHHGVCTETQVMETMKRMAGVVDRQNADDPLYTPMAKDFDASVAFQAACDLVFQGREQPSGYTEPILHARRRELKAK
LGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 55