Gene Information

Name : cspD (BAM5036_1935)
Accession : YP_007497635.1
Strain : Bacillus amyloliquefaciens UCMB5036
Genome accession: NC_020410
Putative virulence/resistance : Unknown
Product : Cold shock protein CspD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2106341 - 2106541 bp
Length : 201 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16352840, 9920884; Product type f : factor

DNA sequence :
ATGCAAAACGGTAAAGTAAAATGGTTCAATAACGAAAAAGGATTCGGCTTCATCGAAGTTGAAGGCGGAGACGACGTATT
TGTTCACTTCACTGCTATCGAAGGAGAAGGATACAAATCATTAGAAGAAGGACAAGAAGTTTCTTTTGAAATTGTCGAAG
GTAATCGTGGACCTCAAGCTTCTAATGTTGTAAAACTCTAA

Protein sequence :
MQNGKVKWFNNEKGFGFIEVEGGDDVFVHFTAIEGEGYKSLEEGQEVSFEIVEGNRGPQASNVVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-15 60