Gene Information

Name : D521_1538 (D521_1538)
Accession : YP_007502841.1
Strain : beta proteobacterium CB CB
Genome accession: NC_020417
Putative virulence/resistance : Unknown
Product : Cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1503774 - 1505693 bp
Length : 1920 bp
Strand : -
Note : -

DNA sequence :
ATGATTCCTGAGTTTGGGCATTACGCATTAATTTTGGCCTTATGTATTGCCATCATCCAGGGGATCCTGCCGCTAGTTGG
CGCCCACCAAGGGCGACGCGAATGGATTTTGTTGGCTAGACCGGCTGCACAAACGGTTTTCCTTTTACTTGCTATTGCAT
TTGTGATTTTGGCCTGGAGCTTTTACTCGAATGATTTCTCTGTTCTCTATGTAGCAGAGCATTCAAACTCACAAATGCCG
GTCATCTATCGCTTAGGTGCGGTATGGGGTGGTCATGAAGGTTCTTTATTGTTGTGGATTTTCTTGTTATCGACTTGGAC
ATTTTTAGTCGCTCAACTCTCCAAGTCGCTTGATGAATTTATGGTGGCCCGTGTGATCGGCGTCTTAGGCTTAGTCATCA
CTGGCCTGCTCTTATTTGTTCTCATGACCTCCAATCCGTTCGAGCGATTATTACCAGCTGCCCAGGATGGACGCTCTTTA
AATCCGCTTTTACAAGATCCGGGATTGGTCTTTCATCCACCCATGTTGTACATGGGCTATGTTGGCTTCTCGGTAGCATT
TGCATTTGCAATTGCGTCTTTATTGTCTGGTCGCCTTGATGCCGCTTGGGCGCGTTGGTCGCGTCCATGGACAACTGCTG
CTTGGGTATTTCTAACGCTTGGTATTGCCTTAGGCTCTTGGTGGGCTTATTACGAATTAGGTTGGGGTGGTTGGTGGTTC
TGGGACCCTGTTGAGAATGCTTCATTTATTCCCTGGTTGGTTGGCACTGCCTTGCTCCACTCTTTAGCGGTTACTGAGAA
GCGTGGTGGCTTTAAGAGTTGGACGGTATTGCTGGCAATTACAGCCTTCTCCCTCTCACTTCTGGGAACCTTTTTAGTGC
GCTCTGGAGTACTGACTTCAGTACACGCATTTGCGACTGACCCCAAGCGCGGCATCTTTATTTTGATTTTCTTGGTATTG
GTAGTGGGATCCTCTTTAACCCTCTACGCTTGGCGCGCTCCGAAGAGTACGCTTGGTGGTAAGTTCAGCTTCACATCTCG
CGAGACCTTTATTTTGTTGGGTAATGTTTTCTTGGTGGTGTCTGCTGCATCAGTGCTCTTGGGTACGCTATATCCCTTGC
TGATCGATGCTCTCCACTTAGGTAAGATCTCAGTGGGCCCTCCATATTTCAATAGCGTATTTGTCCCCATCATGATCCCT
CTGTTGGTATTGATGGGAGTTGGACCCTGGACTAGCTGGAAAAACTCCAATCTCTTAGATGTGATTAAGCGCTTATGGAT
TGCAGCCCTAGTGGCAGTGATCGCCGCCGCTTTGATTCCGTTTGCCATGGGTGAATTTACTTGGCTCAGTAGTCTTGGTT
TCTTATTGGCTTTCTGGGTCATTGCTTCCGGCGTGTTGCAAATCATTCGCCAGGCAAAGGCAGGTAAGCCTACACGTTCA
TTCATCGGCATGCAGGTAGCGCATCTCGGTATAGCGGTGTTTGTGATTGGCGTCACGATGGTGGGAGCCTACCAGGAGGA
AAAAGATGTGCGCATGCTTGCAGGTGAAAGTGTGAGTGTGGGTGGCTATCAAATACAGCTTCAGAGCGTCAACGCAGTTC
CTGGTCCAAACTACAAAGCCATGCAGGGGACTTTCTTGTTGACCCGCAATGGGAAGCTAGAGGCCACGATGTACCCAGAA
AAACGTAGCTACTTTTCCTCAACAATGCCAATGACTGAAGCGGCGATTGATGCTGGCTTGACAAGAGATATCTATGTTTC
ATTGGGTGAAGAGTTAGACGATAAAGCATGGGCAGTGCGAGTCTATTACAAGCCTTTTGTTGATTGGATTTGGGGTGGTT
GCGTATTGATGGCGCTGGGCGGCCTCTTGGCAATGTCGGATAAACGTTATCGCATGAAGTTGAAGAAGGCGACGGCATGA

Protein sequence :
MIPEFGHYALILALCIAIIQGILPLVGAHQGRREWILLARPAAQTVFLLLAIAFVILAWSFYSNDFSVLYVAEHSNSQMP
VIYRLGAVWGGHEGSLLLWIFLLSTWTFLVAQLSKSLDEFMVARVIGVLGLVITGLLLFVLMTSNPFERLLPAAQDGRSL
NPLLQDPGLVFHPPMLYMGYVGFSVAFAFAIASLLSGRLDAAWARWSRPWTTAAWVFLTLGIALGSWWAYYELGWGGWWF
WDPVENASFIPWLVGTALLHSLAVTEKRGGFKSWTVLLAITAFSLSLLGTFLVRSGVLTSVHAFATDPKRGIFILIFLVL
VVGSSLTLYAWRAPKSTLGGKFSFTSRETFILLGNVFLVVSAASVLLGTLYPLLIDALHLGKISVGPPYFNSVFVPIMIP
LLVLMGVGPWTSWKNSNLLDVIKRLWIAALVAVIAAALIPFAMGEFTWLSSLGFLLAFWVIASGVLQIIRQAKAGKPTRS
FIGMQVAHLGIAVFVIGVTMVGAYQEEKDVRMLAGESVSVGGYQIQLQSVNAVPGPNYKAMQGTFLLTRNGKLEATMYPE
KRSYFSSTMPMTEAAIDAGLTRDIYVSLGEELDDKAWAVRVYYKPFVDWIWGGCVLMALGGLLAMSDKRYRMKLKKATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 3e-166 62
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 7e-127 57