Gene Information

Name : ysaC (lilo_1731)
Accession : YP_007509054.1
Strain : Lactococcus lactis IO-1
Genome accession: NC_020450
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1884857 - 1885636 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGTTACTCGAAGTAAAACATCTCAAGAAAATTTTTAAAACAAGATTTTCAAAAGAAGAAACCACAGCCCTAGTTGACAT
TGATTTTGGTGTAGAAGAAGGCGAATATATTGCCATTATGGGGGAATCTGGTTCAGGAAAAACAACCTTGTTGAATATCC
TATCAACTCTTGAAAAACCAACTTCTGGACAAGTACTCTTAAATAAAGAAGACATCACAGCTATTAAAGATAAAGAAATT
TCTGCATTTAGACGTGATCATCTTGGTTTTGTCTTCCAAGATTTCAATTTACTTGATACCCTTAATGTCAGAGACAATAT
TTATCTTCCACTCGTTTTATCAAAATCAAGCGTAGAATTAATGAAAAGTAGACTAAAAATTCTCGCACCTAAACTAAACA
TTGAAAATCTCTTAGAAAAACAACCTTTTGAACTTTCAGGAGGACAAAAACAGCGGGTTGCTGTAGCCCGTGCCTTGATT
AGCCAACCTGATTTAGTTCTTGCCGATGAACCTACAGCTGCTTTGGACTTTAAAAACTCAGAAGACTTACTCAATCTTTT
TGAAGAAATTAATGATAGTGGTCAAACTATTATCATGGTTACTCACTCAAGTTTAGCTGCAAGCCATGCGAAACGTGTTC
TTTTTATAAAAGACGGTGTCCTTTACCACCAACTTTATCGTGGAGAAAAAAGCTCAACTGAATTTGCAAAAGAAATCACT
CTTTCAATGACTGCTTTTTTGGGAGCAGCAGAGGATGAGGAGGTGTCCTTGAATGCTTAG

Protein sequence : 
MLLEVKHLKKIFKTRFSKEETTALVDIDFGVEEGEYIAIMGESGSGKTTLLNILSTLEKPTSGQVLLNKEDITAIKDKEI
SAFRRDHLGFVFQDFNLLDTLNVRDNIYLPLVLSKSSVELMKSRLKILAPKLNIENLLEKQPFELSGGQKQRVAVARALI
SQPDLVLADEPTAALDFKNSEDLLNLFEEINDSGQTIIMVTHSSLAASHAKRVLFIKDGVLYHQLYRGEKSSTEFAKEIT
LSMTAFLGAAEDEEVSLNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ysaC YP_007509054.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-38 46
ysaC YP_007509054.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-40 45
ysaC YP_007509054.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-36 42