|
Name : S58_30860 (S58_30860) Accession : YP_007512673.1 Strain : Bradyrhizobium oligotrophicum S58 Genome accession: NC_020453 Putative virulence/resistance : Unknown Product : heme lyase, CcmF subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3490563 - 3492551 bp Length : 1989 bp Strand : - Note : - DNA sequence : ATGACAGCGGAGGCCGGATCCTTTGCACTAATTCTCGCGCTTCTCGTATCCCTGATGCAGTCGATCGTTCCATTCGCTGC GCTGCGTCGTCAATCCGCGGTGATCGCCGGCTTCGTTCGTCACGCTGCCCTGGCTCAGTTTCTCTTCGTCGCAACCGCAT TCGCCTGCTTGACGTCGCTCTTCGTCCACTCCGACTTCTCAGTCCAGGTCGTCGCAGCGAATTCGCACACGCTGAAGCCG CTGCTCTACAAGGTCTCCGGCGTCTGGGGGAACCATGAGGGATCCATGCTGTTGTGGGTCCTGATTCTCTCGGTGTTCGG CGCGGCCGTCGCGCTGTTCGGAACGAACCTTCCCGACCGGCTGCAGAGCAACGTGCTCGGCGTGCACGGCATGATCGGCC TCGGCTTTCTGGCCTTCATCGTCTCGACGTCGAATCCGTTCGCGCGACTGACCGAAGCGCCTCTTGAAGGCAATGGGCTC AATCCCATTCTGCAGGATCCCGGCCTCGCCTTTCATCCGCCGTTTCTGTACCTGGGCTACGTCGGCTTCTCGATGGCGTT CTCGTTCTCGGTTGCCGCGCTGATCGAGGGAAAGGTCGATGCAGCCTGGGCCCGGTGGGTTCGACCGTGGGTGCTGGCGG CATGGTGCTTTCTCACCATTGGAATCACGCTCGGCAGCGCGTGGGCCTACTACACGCTCGGTTGGGGTGGCTGGTGGTTC TGGGACCCCGTCGAGAACGCGTCCTTCATGCCGTGGCTCGCGGGGACTGCGCTGCTGCATTCCGCCCTGGTGGTCGAGCG TCGCAGCGCCCTCCAAAGCTGGACGATTCTGCTCGGGATCGTGACGTTCTCGTTGAGCCTGATCGGGACCTTCCTGGTGA GGTCCGGGGTGCTCACCAGCGTTCACGCCTTCGCACAGGATCCATCGCGCGGCGCATTCATCCTGGCGCTGATCCTGGTG GCAACCGGCGGGGCGCTGACGCTGTATGCGGTCCGGGCCCCAGGCCTGAAGCACGGTGCGTTGTTCGGAGTCGTCAGCCG CGAGAGCGGCCTCGTGCTCAACAACGTGCTGCTGACGACAGCGGTGGCCACGGTCTTTCTCGGCACGTTCTATCCGCTGC TCGTCGACATGATGGGGAACGACAAAATCTCCGTCGGGCCGCCCTACTACAACATGACGTTCATTCCCATCATGGTTCCG CTGCTGCTCGCCATGGTGATTGGCCCGGTCCTGAAATGGAAGCGCGATCTGCTCGCAGCGGCGCTGCAACGAGTTCGGCT CGCCGGCGGGCTGGCGGTATTCGCCGTCGTCGCCATCCTGATCGCGACGTTCGGGCACCATGTCCTGGTCGCGTTCTTCT TCGGCATCGCCGTCTGGCTCGTCGTCGGCTCGCTGATGATACTTGCTCATCGCGTGCGCCTCGGCACCACAACGCCGCTG GCAACCTCGCTCAACCTCGCGCGCACCACTCCGTTCGCGGTCTACGGCTTGGTGCTGGCTCATGCGGGTATGGGTGTCAC CGTGGCCGGCATAACCGGAATGACTGCGTGGGCCAGCGAAAAGGTCGAGATGCTGCGGCCGGGGCAGAGCCTGCAGCTTG CGGGCTACGACATAAAGCTGCGCGCGATCGGAAAGTTTCCGGGCCCCAACTACGAAGCCGAACGAGGTACGTTCGACATC ACGCGGAACGGCAAGCCGTTTACGCAACTCTCCAGCGAGCGCCGCTTCTATCCCGTCAGACAGCAGCTGACCACCGCGGC GGGTATTCGCACCAACCTGATCTGGAACGTCTACGTGACGCTCGGCGATCCCGACGACAAGGGCGGCTGGGCGGTGCGCT GCTACTATCATCCCCTGGTGCCGCTGGTCTGGATCGGCGCGCTGATGATGGCTTGCGGTGGCTTCATCTCGCTCGCCGAT CGGAGATTTCGCATCGGTGCACCGCGACGGGCAATGCAGGCTGTGCCGATTGCCGTTCCAGCTGAATAG Protein sequence : MTAEAGSFALILALLVSLMQSIVPFAALRRQSAVIAGFVRHAALAQFLFVATAFACLTSLFVHSDFSVQVVAANSHTLKP LLYKVSGVWGNHEGSMLLWVLILSVFGAAVALFGTNLPDRLQSNVLGVHGMIGLGFLAFIVSTSNPFARLTEAPLEGNGL NPILQDPGLAFHPPFLYLGYVGFSMAFSFSVAALIEGKVDAAWARWVRPWVLAAWCFLTIGITLGSAWAYYTLGWGGWWF WDPVENASFMPWLAGTALLHSALVVERRSALQSWTILLGIVTFSLSLIGTFLVRSGVLTSVHAFAQDPSRGAFILALILV ATGGALTLYAVRAPGLKHGALFGVVSRESGLVLNNVLLTTAVATVFLGTFYPLLVDMMGNDKISVGPPYYNMTFIPIMVP LLLAMVIGPVLKWKRDLLAAALQRVRLAGGLAVFAVVAILIATFGHHVLVAFFFGIAVWLVVGSLMILAHRVRLGTTTPL ATSLNLARTTPFAVYGLVLAHAGMGVTVAGITGMTAWASEKVEMLRPGQSLQLAGYDIKLRAIGKFPGPNYEAERGTFDI TRNGKPFTQLSSERRFYPVRQQLTTAAGIRTNLIWNVYVTLGDPDDKGGWAVRCYYHPLVPLVWIGALMMACGGFISLAD RRFRIGAPRRAMQAVPIAVPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-123 | 46 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-106 | 46 |
