Gene Information

Name : S58_61140 (S58_61140)
Accession : YP_007515676.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system (ABC transporter), ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6918610 - 6919293 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
GTGGCTGAGGCGATCCTGCGTCTGGAGAAGGTCTGCAAGGCCTACAATGTCGGTCTTCCGACCGAGAGCGAGGTGCTGCA
CGACATTGATCTCGAGGTCGACCGTGGCGAGTTCGTCGCGCTGATCGGCCCGTCCGGCTCCGGCAAGAGCACCTTGCTCA
ACATCGTAGGTCTGCTCGACCGGCCGACCTCCGGGAGGTTGACGATCAAGGGCCAGGATACTGCATCGCTCAGCGACACG
GAGCTCACGCATTTGCGTGGCCACACGATCGGGTTCATCTTCCAGTCTCATCTCCTGATCTCCGCCTTCACGGCCAGGGA
GAACGTGATGATGCCGCTGCTGGTCGACCGCGGCTTTCCGGGCCCCGAGATCGAGGCTCAGGCTTCGAGGCTGCTCGACC
AGGTCGGCCTGGCGAAATTCGCGGACCACCTCGCGAGCAACATGTCGGGCGGCCAGCAGCAGCGCGTCGCGGTGGCGCGG
GCGCTGGCGATGAACCCCGATCTGGTGCTCGCCGACGAGCCGACCGGCAATCTCGACACCAGGTCGGCCGAGGCCGTCTT
TGACCTGATGCGCCAGGTCAACCGGGAGGTCGGCACGAGCTTTCTGCTCGTCACCCACAACCTTGATCTGGCCCGGCGCT
GTGATCGCATCATCGAGGTTGTCGACGGCCGCATCCAGAGCTGA

Protein sequence : 
MAEAILRLEKVCKAYNVGLPTESEVLHDIDLEVDRGEFVALIGPSGSGKSTLLNIVGLLDRPTSGRLTIKGQDTASLSDT
ELTHLRGHTIGFIFQSHLLISAFTARENVMMPLLVDRGFPGPEIEAQASRLLDQVGLAKFADHLASNMSGGQQQRVAVAR
ALAMNPDLVLADEPTGNLDTRSAEAVFDLMRQVNREVGTSFLLVTHNLDLARRCDRIIEVVDGRIQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S58_61140 YP_007515676.1 lipoprotein-releasing system (ABC transporter), ATP-binding protein LolD CP001581.1.gene798.p Protein 1e-31 44
S58_61140 YP_007515676.1 lipoprotein-releasing system (ABC transporter), ATP-binding protein LolD NC_012469.1.7686878. Protein 6e-33 44
S58_61140 YP_007515676.1 lipoprotein-releasing system (ABC transporter), ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-28 44