Gene Information

Name : S58_63200 (S58_63200)
Accession : YP_007515881.1
Strain : Bradyrhizobium oligotrophicum S58
Genome accession: NC_020453
Putative virulence/resistance : Unknown
Product : glycolate oxidase, subunit GlcD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7123939 - 7125432 bp
Length : 1494 bp
Strand : -
Note : -

DNA sequence :
ATGGCGATCATGATGCCGGAGGCTGATCAGGCGGTGCTGGCGCGCCGCGACGGAATCGTTGCTGCACTGCGTGCGATCGT
GCCGGGCGAGGGCGTCATCGACAGCGCCGCCGAGATGCTGCCTTACGAGTCCGACGGGCTGATGGCCTACCGGCAGCCGC
CAATGGTCGTGGTGCTGCCGGAGACGACCGCGCAGGTCTCGCATGTCCTGAAATACTGCCATGAACAAGGCATCAAGGTG
GTCCCGCGCGGCTCCGGAACGTCGCTGTCCGGCGGCGCGCTGCCGCTCGCCGACGGCGTGCTGCTCGGGCTCGGCAAGTT
CAAGCGCATCCGCGACATCGACTTCGACAACCGCGTCGTCGTCACCGAGCCCGGCGTCACCAATCTCGCCATCAGCCAGG
CGGTCGCGCATGCCGGCTTCTACTATGCGCCGGACCCGTCGTCGCAGATCGCCTGCTCGATCGGCGGCAACGTCGCGGAG
AATTCCGGCGGCGTGCACTGCCTGAAATACGGCATGACCACCAACAACGTGCTCGGCTGCGAGTTCGTGCTGATGACTGG
CGAGGTCTTGCGCATCGGAGGCAAGTGCACCGAGAACGCCGGCTACGACCTGATGGGGCTGATCACCGGATCGGAAGGGC
TGCTCGGCGTGGTCACCGAGGTGACGGTGCGCATCCTGCAGAAGCCGGAGACGGCGCGCGCGCTGATGGTCGGCTTCGCC
GAGGTCGAGGCGGCCGGCGAATGCGTCGCCCGCATCATCGGCGCCGGCATCATCCCCGGCGGCATGGAGATGATGGACAA
GCCGGCGATCCACGCCGCCGAGGCCTTCGTCCATGCCGGCTATCCGCTCGACGTCGAGGCGCTGCTGATCATCGAGCTCG
ATGGCCCCGGCGTCGAGGTCGACGAGCTGATCGGCCGGGTCGAGACCATTGCAAACGGCTGCGGCTCGACCACCTGCCGC
ATCTCGACCTCCGAGGCCGAGCGCAATCTGTTCTGGGCCGGCCGCAAGGCGGCTTTCCCGGCGGTCGGCCGCATCTCGCC
GGACTACCTCTGCATGGACGGCACCATCCCGCGCGGCGCGCTGCCGAAGGCGCTGGCGCGCATCCGCGAGCTGTCGGAAA
AATACCAGCTCGGCTGCGCCAACGTCTTCCACGCCGGCGACGGCAATCTGCATCCGCTGATCCTGTACGACGCCAACAAG
CCGGGCGAGATGGAGCGGGCGGAAGCCTTCGGCGCCGACATCCTGCGCTGCTGTGTCGAGCTCGGCGGCGTCCTGACCGG
CGAGCACGGCGTGGGCATCGAGAAGCGCGATTTGATGCCCGAGATGTTCACCGAGATCGACCTCAACCAGCAGCAGCGGG
TGAAGTGCGCCTTCGACAGCCAGGGGCTTCTCAATCCCGGCAAGGTCTTCCCGACCCTGCATCGCTGCGCCGAGCTCGGC
CGCATGCACGTCCACGCCGGCAAGCTGGCGTTTCCCGATCTGCCGAGATTCTGA

Protein sequence :
MAIMMPEADQAVLARRDGIVAALRAIVPGEGVIDSAAEMLPYESDGLMAYRQPPMVVVLPETTAQVSHVLKYCHEQGIKV
VPRGSGTSLSGGALPLADGVLLGLGKFKRIRDIDFDNRVVVTEPGVTNLAISQAVAHAGFYYAPDPSSQIACSIGGNVAE
NSGGVHCLKYGMTTNNVLGCEFVLMTGEVLRIGGKCTENAGYDLMGLITGSEGLLGVVTEVTVRILQKPETARALMVGFA
EVEAAGECVARIIGAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPGVEVDELIGRVETIANGCGSTTCR
ISTSEAERNLFWAGRKAAFPAVGRISPDYLCMDGTIPRGALPKALARIRELSEKYQLGCANVFHAGDGNLHPLILYDANK
PGEMERAEAFGADILRCCVELGGVLTGEHGVGIEKRDLMPEMFTEIDLNQQQRVKCAFDSQGLLNPGKVFPTLHRCAELG
RMHVHAGKLAFPDLPRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 2e-127 59