|
Name : C427_1613 (C427_1613) Accession : YP_007543070.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1520269 - 1522275 bp Length : 2007 bp Strand : + Note : - DNA sequence : ATGTTAGCTGAATTAGGTAATTTCGCTTTAGTACTGGCCCTTATGATGGGCATATTGTTATCCATTTACCCTATGTGGGG CGCTTATAAAGATCATTCACAAATGATGGCCATGGCGAAACCTTTGGCAATTGGCATGTTTATATTTACCGCTTTTGCAT ATGGTTGTCTGACGCATGGATTTATCACTGATGACTTCAGCATAGCCTATGTGGCGAACACATCGAACAGTACCTTGCCG ATCTATTACAAAATTACCGCTGTGTGGGGTGGCCATGAAGGCTCATTTTTACTATGGGTATTGATATTTTCTATTTGGAC TGTGGCGGTAGCACTATTTAGTAAGGCTATCCCCATGAAAATGGTCGCCAGAGTGTTATCTATTTTAGGTATGGTAGGTA TTGGTTTTTATTTGTTTATGTTACTCACCTCTAATCCTTTTGATCGGCTGTTACCTTTTTTTCCTATTGATGGCAAAGAC TTAAACCCATTGTTACAAGATTTTGGGATGATCATTCACCCTCCTATGTTGTATATGGGGTATGTAGGTTTTTCAGTGGC GTTTGCCTTCGCGCTTGCTGCGCTGATATCTGGGCAATTAGACTCCACTTGGGCCCGTTGGTCTAGGCCTTGGACATTGG CTGCGTGGTCTTTTCTAACTGTAGGTGTCGCGCTTGGCAGTTGGTGGGCCTACTACGAATTGGGTTGGGGCGGTTGGTGG TTTTGGGATCCTGTTGAAAATGCTTCATTCATGCCTTGGCTAGTGGGTACTGCTTTGATCCATAGTTTAGCTGTCACAGA AAAACGTAAAGTGTTTAAGTCTTGGACCGTATTGTTAGCTATATCTGCGTTTTCATTAAGCCTGCTTGGTACGTTTCTGG TGCGTTCAGGGGTGTTGGTTTCAGTACATTCATTCGCTAGCGACCCTAGTCGTGGTTTATTTATTCTTGGCTTACTAGTC ATAATTATCGGCGGCTCTTTGGCTTTGTATGCCTATAGGGCTCCGCAATTGAAAGGGAATGGAAGATACCAACTGTTTTC AAGAGAAGTGTTATTGATTGGTAATAACGTGTTCTTAACCGCGGCTACTTTGGTCGTGTTGTTAGGTACCTTGTTACCCT TGGTACATAAAGAAATCGGTATGGGCTCTATTTCAATCGGCGCACCCTTTTTTAACCAAATGTTTACTTATCTTATTGTG CCGTTTGTACTGTTTATGGGAATTGGCCCGCTGTCACGCTGGAAAAGCCAATCTCCTCAAGCGTTATATAAGCAACTACT GATTGCATTTGGTTTAAGTGTGTCGGCTGGTATTTTGGTGAATGCTAGTTTCGAACAATCTAGCTATATGGCAGCGTTAG GCTTAGTCATGAGTTTTTGGATTATTATTACGACTATCATGGAAATACGGCAGCGTATTCAACCACAAGTTGAGTCAGGT AAATTCACCATTTCACAAAGCCTTAAAAAACTGACCCGAAGCCATTGGGGCATGGTATCGGGGCATCTTGGTTTTGCGGT AACACTCATCGGCATTGCATTAGTTAGTGCATATAGTGTGGAGCGCAATGTACGTATGGGGTCAGGAGATCGCGTCACTT TGCAAGGTTATGAATTTGTATTTAAAGGGGTTTCTGAATTTACAGGACCTAATTATACAGCCGATGTTGGGCATCTAGAT GTTTTCCAAAACGGGCAAAAAATATCGTCACTTGCTGCCGAAAAACGTTTTTATCCGGTACAACGAAATGTTATGACGGA AGCGGGCATTGACTCGGGCTTAACTCGAGACTTATTTGTAGCATTGGGCGAGCAGCTTAAAAATGGCGATTGGTCGTTAC GCATTTATGTGAAACCTTTTATTAACTGGATATGGTTAGGCGCATTTATAATGGCGTTTGGCGGCGTGTTGTCGATTAGC GATAAGCGGTATCGAATGACGAAATTAGGGACCAAACTTAAAGCTAATGCAACTCCAAATCCAGCTTTGAAGGAGCAAAT ATCTTGA Protein sequence : MLAELGNFALVLALMMGILLSIYPMWGAYKDHSQMMAMAKPLAIGMFIFTAFAYGCLTHGFITDDFSIAYVANTSNSTLP IYYKITAVWGGHEGSFLLWVLIFSIWTVAVALFSKAIPMKMVARVLSILGMVGIGFYLFMLLTSNPFDRLLPFFPIDGKD LNPLLQDFGMIIHPPMLYMGYVGFSVAFAFALAALISGQLDSTWARWSRPWTLAAWSFLTVGVALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRKVFKSWTVLLAISAFSLSLLGTFLVRSGVLVSVHSFASDPSRGLFILGLLV IIIGGSLALYAYRAPQLKGNGRYQLFSREVLLIGNNVFLTAATLVVLLGTLLPLVHKEIGMGSISIGAPFFNQMFTYLIV PFVLFMGIGPLSRWKSQSPQALYKQLLIAFGLSVSAGILVNASFEQSSYMAALGLVMSFWIIITTIMEIRQRIQPQVESG KFTISQSLKKLTRSHWGMVSGHLGFAVTLIGIALVSAYSVERNVRMGSGDRVTLQGYEFVFKGVSEFTGPNYTADVGHLD VFQNGQKISSLAAEKRFYPVQRNVMTEAGIDSGLTRDLFVALGEQLKNGDWSLRIYVKPFINWIWLGAFIMAFGGVLSIS DKRYRMTKLGTKLKANATPNPALKEQIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 7e-146 | 57 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-136 | 52 |
