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Name : C427_4128 (C427_4128) Accession : YP_007545581.1 Strain : Glaciecola psychrophila 170 Genome accession: NC_020514 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3982223 - 3984022 bp Length : 1800 bp Strand : - Note : - DNA sequence : GTGATCGGCATTTGTGCTTTATACGCCACTCCGAATTTGTATGGCGAAGATCATGCAGTGCAAATATCTGCAGGAAAAAA TGCGGTTCTTGATGCTGCTGTAGTCGAAAAAGTCACAGCTGAACTTGCTGCTGCTAATATATCCAGTAAAAGTATTGTGC TAGAAAACGATCAAATACTTATTCGTTTGAAGGACTCTGATACCCAGTTAGTGGCTCGCGAAAAAATCGATAAAGCTTTA GGTGATAATTATATTGTTGCTATGAACTTGGCACCTGACACACCAGATTGGCTAGAAAGTTTGGGTGGTACACCAATGAA ACTTGGTTTGGACTTACGAGGTGGTGTTCACTTTCTAATGGAAGTGGATATGAAATCAGCTCTGTCTAAAACGTTACAAG ATATGGCGGGAGATTTTAAAACCGCATTACGTGATGAAGGTATTCGTTACCGTACAGTAAAACAACTGGATGACGGGGTC GAAATTTATTTTCGCGATCAAGAAACACTCGATAGTGCAGAGTTCTTCCTTAAAAACCGTAATCGTGACTTAGTGTTTGT TGAAAGAACTGGTTTAGTTATTTTTGCCAATATGTCTGATCAAAAACTAGCTGAGACTCGCGATTACGCGGTAAAGCAAA ACATCACTATTATTCGTAATAGGGTAACCCAATTAGGTGTGTCTGACCCAACAGTACAAAAGCAAGGGCCTGACCGCATC GTTGTGCAACTACCGGGTATTCAAGACACAGCCAAAGCCAAAGAAATTTTGAACGCTACAGCTACCCTAGAATATCGTGA AGTAGACCTTGAACATGACGTGCGTGATGCCATTAATGGCCGCGTGCCTGCTGGATCTGAATTGTTACCTTATGACAAAG GCGGTCCGCAGTTACTTAAGAAACAAGTCATAGTGGCCGGTAGTTCAATTATCGATGCCAACAGCGGTGTCGATCAATAT GGTATGCCCAAGGTATCTATATCACTTGACTCCAAAGGTGGCGCCAAGATGCTTAACTTCACTAAACGTGCAGTGGGCAA ACCTATGGCGGTGGTTTTTATTGAATTTAAAACCACCGGTGAGAGAGACGCAGACGACAAGCTTATTTTTGAAGAAGAAA GGCGTGTCATTAGTGTCGCTACTATCAACGGTGTGTTCGGAAATCAGTTTGAAACGACCGGATTAGACTCTCCGCAAGAA GCTTATGACTTAGCATTACTATTAAGAGCAGGGGCTTTGATTGCACCGATTCAAATTATTGAAGAGCGCACAGTCGGTCC AAGCCTAGGTCAAGAAAATATCGACTTAGGGACAAAAGCTATTGTTTATGGCTTTATTGCCGTGCTGATTTTTATGCTAA TTTACTACAAAAAATTTGGTTTTGTTGCCAATATCGCTTTGACGCTTAACTTAGTGATGATTATTGGCGTTATGTCAATG TTCCCTGCTGCCGCGCTAACGTTGCCTGGTATGGCAGGTATAGTGTTAACTGTGGGTATGGCTGTAGATGCTAACGTACT AATATTTGAACGAATACGTGAAGAAGTTAAAGATGGGCGAAGTCCGCAACAAGCTATTCATTACGGCTACGATAGTGCGT TTTCAACCATATTAGATGCCAATATTACGACCTTCCTGGTTGGGTTGATTTTGTTTGCAGTAGGCACAGGTCCGATCAAA GGATTCTCTATTACCTTGATGATCGGGATCATTACTTCAATGTTCACTGCGATCATTGTGACTCGTGTCATCGTTAATGC ATGGTGGGGCGGTAGACGTCTGACCAAGCTGTCAATTTAG Protein sequence : MIGICALYATPNLYGEDHAVQISAGKNAVLDAAVVEKVTAELAAANISSKSIVLENDQILIRLKDSDTQLVAREKIDKAL GDNYIVAMNLAPDTPDWLESLGGTPMKLGLDLRGGVHFLMEVDMKSALSKTLQDMAGDFKTALRDEGIRYRTVKQLDDGV EIYFRDQETLDSAEFFLKNRNRDLVFVERTGLVIFANMSDQKLAETRDYAVKQNITIIRNRVTQLGVSDPTVQKQGPDRI VVQLPGIQDTAKAKEILNATATLEYREVDLEHDVRDAINGRVPAGSELLPYDKGGPQLLKKQVIVAGSSIIDANSGVDQY GMPKVSISLDSKGGAKMLNFTKRAVGKPMAVVFIEFKTTGERDADDKLIFEEERRVISVATINGVFGNQFETTGLDSPQE AYDLALLLRAGALIAPIQIIEERTVGPSLGQENIDLGTKAIVYGFIAVLIFMLIYYKKFGFVANIALTLNLVMIIGVMSM FPAAALTLPGMAGIVLTVGMAVDANVLIFERIREEVKDGRSPQQAIHYGYDSAFSTILDANITTFLVGLILFAVGTGPIK GFSITLMIGIITSMFTAIIVTRVIVNAWWGGRRLTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 7e-116 | 46 |
