Gene Information

Name : C427_4146 (C427_4146)
Accession : YP_007545599.1
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4000403 - 4001104 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGACGTTAGTGGCTTAGTCAAACAAATTATTGATGGTCATTCCAATAAAAATATCTTAGACAACCTCGAGTTTCA
TCTAGAGGCGAACCAATCTGTAGCCATCAGTGGGGATTCAGGCTCAGGTAAGTCGACCTTACTGAATATTCTCGCTGCTT
TAGATTATTCCGATAAGGGACAGGTCAAAGTGGCGGGGTTGGCACTCAATATCATGAGTGAATCTCAAGCTGATCAGTTT
CGAAAAAAACACCTAGGCATCGTTTTCCAACAATTCAATTTAATTGATTGTTTATCGGTTTGGGACAACATTACCTTCCC
AGCCAGACTAAATGGTTTACCCATCGGCAGTTACCATAAAGATTTATTAGAACAACTGGGATTAAGCTCACACAAAGACA
AATTACCGGTTAACTTATCGGGCGGTGAACAACAAAGAGTCGCGATTGCCCGCGCCTTATCTCATCAACCCAGCTTAGTG
TTGGCCGATGAACCCACTGGAAACTTAGACGATAAAAATAGCCAAGCTGTAAGTGAGTTATTGTTTGGATTATGTAAAAA
ACTAGGCCTAACGTTAGTTGTTGTAACGCACAGTCCGAAAGTAGCGGCTTTTGCAGATACCCGCTTGTTGTTACGGCAGG
GACAACTCCATCCTGTAGCAGATCAGAGCCCATATCCGACGCCAAACAGCGTATCAAGCTGA

Protein sequence : 
MIDVSGLVKQIIDGHSNKNILDNLEFHLEANQSVAISGDSGSGKSTLLNILAALDYSDKGQVKVAGLALNIMSESQADQF
RKKHLGIVFQQFNLIDCLSVWDNITFPARLNGLPIGSYHKDLLEQLGLSSHKDKLPVNLSGGEQQRVAIARALSHQPSLV
LADEPTGNLDDKNSQAVSELLFGLCKKLGLTLVVVTHSPKVAAFADTRLLLRQGQLHPVADQSPYPTPNSVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C427_4146 YP_007545599.1 hypothetical protein CP001581.1.gene798.p Protein 8e-34 43
C427_4146 YP_007545599.1 hypothetical protein CP001581.1.gene598.p Protein 2e-30 42
C427_4146 YP_007545599.1 hypothetical protein NC_008702.1.4606598. Protein 1e-29 41