Gene Information

Name : C427_r17 (C427_r17)
Accession : -
Strain : Glaciecola psychrophila 170
Genome accession: NC_020514
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4997893 - 4999417 bp
Length : 1525 bp
Strand : -
Note : -

DNA sequence : 
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGAAACATGTCTAGCTTGCT
AGATGATGTCGAGTGGCGGACGGGTGAGTAATACTTAGGAACATGCCTTTGGGTGGGGGATAACTATTGGAAACGATAGC
TAATACCGCATAACGTCTACGGACCAAAGGGGGGAGCTTGCTCCTCTCGCCCAAAGAGTGGCCTAAGCGAGATTAGCTTG
TTGGTGAGGTAAAGGCTCACCAAGGCGACGATCTCTAGCTGTTCTGAGAGGAAGATCAGCCACACTGGGACTGAGACACG
GCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGAAACTCTGATGCAGCCATGCCGCGTGTGTGA
AGAAGGCCTTCGGGTTGTAAAGCACTTTCAGTTGTGAGGAAAGCTTGTTGGTTAATACCCAGCAGGTATGACGTTAGCAA
CAGAAGAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTCCGAGCGTTAATCGGAATTACTGGGCGT
AAAGCGCACGCAGGCGGTTTGTTAAGCTAGATGTGAAAGCCCCGGGCTCAACCTGGGAATAGCATTTAGAACTGGCAGAC
TAGAGTCTTGGAGAGGGGAGTGGAATTTCTGGTGTAGCGGTGAAATGCGTAGATATCAGAAGGAACATCAGTGGCGAAGG
CGACTCCCTGGCCAAAGACTGACGCTCATGTGCGAAAGTGTGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCACACC
GTAAACGCTGTCTACTAGCTGTTTGTGGATTTAATCCGTGGGTAGCGAAGCTAACGCGATAAGTAGACCGCCTGGGGAGT
ACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACG
CGAAGAACCTTACCTACTCTTGACATACTAGAAACTTTTCAGAGATGAATTGGTGCCTTCGGGAATCTAGATACAGGTGC
TGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTTGCCAG
CCTTAAGTTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTT
ACGAGTAGGGCTACACACGTGCTACAATGGCGAGTACAGAGGGAAGCAAACCTGCGAGGGTAAGCGGATCCCTTAAAGCT
CGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAAATCAGAATGTTGCGGT
GAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGTCTAACCTTC
GGGAGGACGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCCTAGGGGAACCTGGGGTTGGAT
CACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-179 87.9
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-179 87.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-179 87.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-179 87.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-179 87.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-179 87.3