Gene Information

Name : WQG_16260 (WQG_16260)
Accession : YP_007548694.1
Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192
Genome accession: NC_020515
Putative virulence/resistance : Virulence
Product : Alpha-hemolysin translocation ATP-binding protein HlyB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1787167 - 1789329 bp
Length : 2163 bp
Strand : -
Note : Alpha-hemolysin translocation ATP-binding protein HlyB of cellular organisms UniRef RepID=HLYB3_ECOLX

DNA sequence :
ATGGAGTTGCCGTTTTATTTTATAAAAGGAGACAATATGGAAGCTAACCATCAAAGGAATGATCTTGGTTTAGTTGCCCT
CACTATGTTGGCACAATACCATAATATTTCGCTTAATCCGGAAGAAATAAAACATAAATTTGATCTTGACGGAAAAGGGC
TTTCTTTAACCTCTTGGCTTTTAGCCGCAAAATCGTTAGTGTTGAAAGCGAAACACATTAAAAAAGAGATTTCTCGCTTA
CACTTGGTGAATTTACCTGCATTAGTTTGGCAAGATAACGGTAAACATTTTTTATTGGTAAAAGTGGATACCGATAATAA
CCGCTATTTAACTTACAATTTGGAACAAGATGCCCCACAAATTCTGTCACAAGACGAATTTGAAGCCTGCTATCAAGGGC
AATTAATTTTGGTCACATCTAGAGCTTCCGTAGTAGGTCAACTAGCAAAGTTCGATTTCACCTGGTTTATTCCGGCAGTG
ATCAAATACCGAAAAATCTTTCTAGAAACCTTGATTGTTTCGATCTTTTTGCAAATTTTTGCCCTAATTACACCGCTATT
TTTCCAAGTTGTTATGGATAAAGTACTGGTGCATCGAGGTTTTTCAACCTTGAATATCATTACGGTTGCCTTAGCTATTG
TGATCATCTTTGAAATTGTACTAAGTGGTTTGAGAACCTATGTTTTTTCTCATAGCACTAGCCGTATTGATGTTGAATTA
GGCGCTAAATTATTTCGACATTTATTATCACTACCCATTTCTTATTTTGAAAACAGACGAGTTGGAGATACAGTCGCTAG
GGTTAGAGAATTAGATCAAATTCGAAATTTTCTCACAGGGCAAGCATTAACTTCTGTTCTAGATTTATTATTCTCTTTTA
TCTTCTTTGCCGTGATGTGGTATTACAGTCCGAAGTTGACTCTTGTTATTCTTGGCTCATTACCTTTCTATATATTGTGG
TCTATTTTTATCAGTCCAATTTTGCGACGACGTCTAGATGATAAATTTGCCCGAAGTGCTGATAACCAAGCATTCTTAGT
TGAGTCGGTAACAGCCATCAATATGATTAAAGCGATGGCGGTTGCTCCACAAATGACTGATACATGGGATAAACAGCTGG
CAAGCTATGTTTCATCAAGTTTCCGTGTCACCGTATTAGCAACCATTGGGCAACAAGGTGTACAACTTATTCAAAAAACC
GTTATGGTGATTAACCTTTGGTTAGGGGCACACTTAGTTATTTCAGGCGATCTTAGTATTGGACAATTAATTGCCTTTAA
TATGCTGTCAGGACAAGTGATTGCACCGGTGATTCGGTTAGCTCAGCTCTGGCAAGATTTCCAACAAGTTGGGATTTCCG
TCACTCGCTTAGGTGATGTTTTAAACTCTCCAACAGAGCAATATCAAGGAAAGTTATCACTACCAGAAATAAAAGGCGAT
ATCTCATTTAAAAATATCCGCTTTAGATATAAACCAGATGCACCAACTATTTTAAATAATGTGAATTTAGAAATTAGGCA
AGGAGAAGTGATTGGGATTGTTGGACGTTCCGGTTCAGGCAAAAGTACTCTGACTAAATTACTGCAACGTTTTTATATTC
CTGAAAATGGGCAGGTTTTGATTGATGGACATGATCTAGCCTTAGCTGATCCAAACTGGCTACGCCGTCAAATAGGTGTA
GTGCTGCAAGATAATGTGTTATTAAACCGCAGTATCCGAGAAAATATTGCGCTATCAGATCCAGGAATGCCAATGGAGCG
AGTAATTTATGCAGCAAAATTAGCAGGGGCTCACGATTTTATTTCAGAATTGCGTGAAGGTTATAACACCATTGTGGGTG
AACAAGGAGCGGGGCTTTCAGGCGGGCAACGCCAACGGATTGCGATTGCACGAGCCTTGGTAAATAACCCGAAAATCCTG
ATTTTTGATGAGGCAACCAGTGCCCTCGATTACGAGTCTGAGCATATTATTATGCAAAATATGCAAAAAATATGCCAAGG
TCGAACTGTGATTTTAATAGCTCATCGCTTATCTACAGTAAAAAATGCTGATCGGATTATTGTGATGGAAAAAGGGGAAA
TAGTAGAACAAGGCAAACATCACGAATTACTACAAAACAGTAATGGGCTTTATTCTTACTTACACCAATTACAACTAAAT
TAA

Protein sequence :
MELPFYFIKGDNMEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWLLAAKSLVLKAKHIKKEISRL
HLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAV
IKYRKIFLETLIVSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFSHSTSRIDVEL
GAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILGSLPFYILW
SIFISPILRRRLDDKFARSADNQAFLVESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKT
VMVINLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTEQYQGKLSLPEIKGD
ISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGV
VLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKIL
IFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYSYLHQLQLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 83
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 83
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WQG_16260 YP_007548694.1 Alpha-hemolysin translocation ATP-binding protein HlyB VFG1557 Protein 0.0 83
WQG_16260 YP_007548694.1 Alpha-hemolysin translocation ATP-binding protein HlyB VFG1501 Protein 0.0 83
WQG_16260 YP_007548694.1 Alpha-hemolysin translocation ATP-binding protein HlyB VFG0907 Protein 0.0 83
WQG_16260 YP_007548694.1 Alpha-hemolysin translocation ATP-binding protein HlyB VFG0841 Protein 0.0 74
WQG_16260 YP_007548694.1 Alpha-hemolysin translocation ATP-binding protein HlyB VFG1269 Protein 0.0 54