|
Name : WQG_16740 (WQG_16740) Accession : YP_007548742.1 Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192 Genome accession: NC_020515 Putative virulence/resistance : Unknown Product : Cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1837666 - 1839621 bp Length : 1956 bp Strand : - Note : heme lyase subunit NrfE PRK10369; Cytochrome c-type biogenesis protein CcmF of Proteobacteria UniRef RepID=CCMF_HAEIN DNA sequence : ATGATTGCTGAATTAGGCAACTATACCCTTTCTTTGAGTTTAGCACTGTCAGTTATACTGGCAGTGTTGCCACTTTGGGG AGCGGAAAAAAATAACCATACTTTAATCTCACTTGTTCGACCAATGACATGGGCAGTATTCTTAGCTCTGACAGTCTCTT TTGGCTCTTTATTTTATCTTTTTGCTGTAAATGATTTTACGGTGCAATATGTGGTAAACAACTCAAATAGCACCTTGCCG ATTGAATATCGTCTATCTGCTGTTTGGGGGAGCCACGAAGGTTCTCTTCTTTTATGGATTTGGCTACTCTCGCTTTGGAG TGTTGCAGTAGCAAGCTTTAGCCGACAAATGCCAGAAGAGTCGGTTGCTCGTGTATTAGCCGTAATGGGCTTAGTGAGTA TAGGTTTTCTTATTTTTATTATTTTTACCTCTAATCCATTCGACCGTACTTTCCCAAATTTCCCTGTCGATGGACGTGAA CTCAACCCAATGTTGCAAGATGTGGGCTTAATTTTCCACCCGCCATTGTTGTATATGGGTTATGTTGGCTTTTCAGTCGC CTTTGCTTTTGCGATTGCTTCATTGATGACTGGCCGGCTTGATACCGCTTGGGCAAGATGGTCTCGCCCTTGGACAATGG CAGCATGGGTATTCTTAACTCTCGGTATCGTACTTGGTTCTTGGTGGGCATACTACGAGCTTGGCTGGGGAGGCTGGTGG TTCTGGGACCCTGTAGAAAACGCATCACTAATGCCGTGGATTGCAGGTACTGCCTTAATTCACTCATTAGCAGTAACCGA AAAACGCAGTACATTTAAGGCGTGGACAGTGTTACTCGCAATCCTTGCTTTCTCACTCTGCCTACTGGGTACATTCTTAG TACGTTCAGGGATTTTAGTTTCTGTACATGCCTTTGCCTCTGATCCAACACGAGGCTTGTATATTTTGGCTTACTTAGTG ATTGTGATTGGTGGCTCACTTTTACTTTATGCTTATCAAGGCAACAAAATTAAGAGTTTGGATAACTCAGAACGCTATTC TCGTGAAAGCTTACTATTGCTGAACAACATTTTGCTGATGGCATTTTTGTCAGTAGTATTCTTAGGCACAATTTTACCGC TTATTCATAAACAGATTGGGCTGGGCACAATTTCGATTGGTGCACCATTTTTCGACCAAATGTTTATGATTTTAATGGTG CCTTTTGCCTTTTTGTTAGGCGTTGGGCCGCTGGTAAAATGGCGACGCGATCAGTTCTCGGCAATTCGTAAGCCTGTAAT TATTTCAACTCTGCTAATGGCAGTATTAGGTTTTGCTCTGCCATATTTATTTGCCAGCAAAATCACCGTAAGTGTTGTGC TTGGCACAATGATGGCGGTGATTATCATCGCATTATCGCTATACGAGCTACACCAACGTGCAACCCACCGACACAGTTTT GTGCAAGGTTTATTTAAACTCTCTCGTAGCCACTGGGGTATGGTGCTTGCTCACTTAGGTGTCGCAATGACGGTATTCGG CATCGCATTCAGCCAAAACTTCAGTATTGAAAAAGATGTGCGAATGAATGTGGGTGATAAAACTCAAATTTTAGATTACG AATTTACTTTCAAAGGTATTCGTGACAGCAATGGGGCAAACTATATCGGCGGTACAGCGGATATTGAAATCACTCGTAAT GGAAAATACGAAGCAACTCTTGAAGCGGAAAAACGTTTCTATAACGTAAGTAAAATGGGAATGACCGAAGCCGCTATTGA CTGGGGCTTTACTCGTGATTTATATGCCGCATTGGGTGAGCGTTTGGAAGATGGCTCTTGGGGCGTACGCCTTTACTATA AACCGTTTATCCGTTGGATCTGGTTCGGTGGCATATTTATGGCACTCGGTGGATTGCTCTGTATGTTAGATAGACGTTAT CGTTTAAAGGTTGCAACTAAGTCACAATTAGCATAA Protein sequence : MIAELGNYTLSLSLALSVILAVLPLWGAEKNNHTLISLVRPMTWAVFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSTLP IEYRLSAVWGSHEGSLLLWIWLLSLWSVAVASFSRQMPEESVARVLAVMGLVSIGFLIFIIFTSNPFDRTFPNFPVDGRE LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWIAGTALIHSLAVTEKRSTFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYILAYLV IVIGGSLLLYAYQGNKIKSLDNSERYSRESLLLLNNILLMAFLSVVFLGTILPLIHKQIGLGTISIGAPFFDQMFMILMV PFAFLLGVGPLVKWRRDQFSAIRKPVIISTLLMAVLGFALPYLFASKITVSVVLGTMMAVIIIALSLYELHQRATHRHSF VQGLFKLSRSHWGMVLAHLGVAMTVFGIAFSQNFSIEKDVRMNVGDKTQILDYEFTFKGIRDSNGANYIGGTADIEITRN GKYEATLEAEKRFYNVSKMGMTEAAIDWGFTRDLYAALGERLEDGSWGVRLYYKPFIRWIWFGGIFMALGGLLCMLDRRY RLKVATKSQLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-152 | 63 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-135 | 53 |
