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Name : WQG_22070 (WQG_22070) Accession : YP_007549275.1 Strain : Bibersteinia trehalosi USDA-ARS-USMARC-192 Genome accession: NC_020515 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : - COG ID : - EC number : - Position : 2353867 - 2357895 bp Length : 4029 bp Strand : - Note : DNA-directed RNA polymerase subunit beta PRK00405; DNA-directed RNA polymerase subunit beta of Bacteria UniRef RepID=RPOB_SALA4 DNA sequence : ATGGCATACTCATATTCCGAGAAAAAGCGTATTCGTAAGAGCTTTGGTAAACGCCCACAAGTTCTGAACGTACCTTATTT ATTAACCATTCAGCTCGATTCTTTCGATAAATTTATCCAAAGAGATCCAGAAGGACAACAAGGTTTAGAAGCGGCATTCC GTTCTGTGTTTCCAATTGTGAGCCAAAACGGCGCAACTGAACTGCAATATGTTTCTTATGAATTAGGTGAGCCTGCATTT GATGTACGTGAATGTCAAATTCGTGGCACAACCTATGCTGCTCCATTACGTGTAAAACTTCGTTTGGTGTCTTTCGACCG TGAAGCTGCTGCTGGCACAGTAAAAGATATTAAAGAACAAAGCGTTTATATGGGCGAAATCCCACTAATGACCGATAACG GTACATTCGTGATCAACGGTACAGAGCGTGTTATCGTTTCGCAATTACATCGTAGTCCAGGTGTATTTTTCGATTCAGAC AAAGGTAAAACTCACGCTTCAGGAAAAGTGCTTTATAACGCGCGTATTATTCCTTACCGTGGTTCTTGGTTAGATTTTGA GTTCGATCCAAAAGATAACTTATACGCACGTATTGACCGTCGTCGTAAGTTACCTGCCACCATTATTTTGCGTGCTTTAG GTTACACTACTGAAGAAATTTTAAATCTCTTCTTCGATAAAGTGTTGTTTGAAATCAGCGATAACCAACTACTGATGACC TTAGTACCAGAACGTCTGCGTGGTGAAACTGCAGCGTTCGATATTGAAGCAAACGGCAAAGTCTATGTCGAAAGTGGTCG TCGTATCACAGCACGCCATATCAAAGCATTAGAAAAAGATAATATTACTCAAATCGTTGTGCCAACTGAGTACATCGTAG GTAAAGTCACAGCAAAAGATTATATTGATTTAGAAACTGGTGAGATCGTTTGCCCTGCGAATATGGAAATCTCCCTTGAG TTATTAGCGAAACTAGCTCAAGCAGGTTACAACCAAATCGAAGTGTTATTCACTAATGATTTAGATCACGGTGCATACAT TTCAGAAACCTTACGCATTGATCCAACTTACGACCGTTTAAGTGCGTTAGTGGAAATCTACCGTATGATGCGTCCAGGTG AACCACCAACAAAAGAAGCGGCAGAAGGCTTATTTGACAATATGTTCTTCTCAACCGACCGTTATGATTTATCCGCGGTA GGTCGTATGAAGTTCAACCGCTCTTTAGACATTCCTGAAGGCGTGGGTACTGGCATTTTAAGCCACGATGACATCATCGG CGTGATGAAAAAATTGATCGAAATCCGTAACGGTCGTGGCGAAGTGGACGATATCGACCACTTAGGTAACCGTCGTATCC GCAGCGTGGGTGAAATGGCAGAAAACCAATTCCGTATTGGTTTAGTGCGTGTTGAGCGTGCGGTGCGTGAACGTCTTTCA TTAGGCGACTTAGACGGCGTAACCCCACAAGATTTAATCAATGCGAAACCAATTTCTGCGGCAGTAAAAGAGTTCTTTGG TTCATCACAACTTTCGCAATTTATGGACCAAAACAACCCGCTTTCAGAAGTAACGCACAAACGTCGTATTTCGGCATTAG GCCCGGGCGGTTTAACTCGTGAACGTGCAGGCTTTGAAGTACGTGACGTACACACCACTCACTATGGTCGTTTATGTCCA ATCGAAACCCCTGAAGGTCCGAACATCGGTTTGATCAACTCACTTTCTGTTTACGCACGTACTAACAACTACGGTTTCTT AGAAACCCCATTCCGTAAAGTGGTAAATGGTCAAGTAACCGAAGAGATCGAGTATTTATCTGCGATTGAAGAAGGTAACT ACGTTATCGCACAGGCGAACTCAAACTTAGATGAGAATTTCCGCTTTACTGATACTTATGTGACCTGTCGTGGTGAACAC GGTGAATCTGGTTTATACCGTCCAGAAGAAATTCACTATATGGACGTTTCAACCCAGCAGGTTGTTTCTGTTGCAGCTGC GTTAATCCCATTCCTTGAGCACGACGATGCGAACCGTGCGTTGATGGGAGCGAACATGCAACGTCAGGCAGTTCCAACAT TGCGTGCGGACAAACCATTAGTCGGTACAGGTATGGAAAAACCAATCGCACTCGACTCTGGTGTTGCGGTGGTGGCAAAA CGTGGTGGTACTATCCAATACGTTGATGCATCTCGTATCGTAGTGAAAGTAAACGAAGATGAAACCGTTGCAGGCGAAGC GGGTATTGATATTTATAACTTAATCAAATACACCCGTTCTAACCAAAACACCTGTATCAACCAAATTCCTTGTGTGAAAT TGGGTGAACCTGTGGAGCGTGGCGAAATCCTTGCAGACGGCCCTTCAACCGATTTAGGTGAATTAGCATTAGGTCAAAAT ATCCGTGTTGCCTTCATGCCATGGAATGGTTATAACTTCGAAGACTCCATGTTGGTTTCTGAGCGTGTGGTGCAAGAAGA CCGCTTTACCACAATTCACATTCAAGAACTCTCTTGTGTGGCGCGTGACACCAAACTGGGTGCGGAAGAAATTACCGCCG ACATTCCAAACGTAGGTGAAGCTGCATTAAGCAAACTTGATGAATCTGGTATCGTTTATATTGGTGCGGAAGTAAAAGGT GGCGACATCTTAGTGGGTAAAGTAACGCCAAAAGGCGAAACACAATTAACCCCAGAAGAAAAATTACTTCGTGCTATCTT CGGTGAGAAAGCGTCCGACGTAAAAGATAGCTCACTGCGTGTACCAAACGGCACTTCAGGTACAGTTATCGACGTTCAAG TCTTTACCCGTGATGGCGTAGAGAAAGATAAACGTGCGAAAGACATCGAAGAGATGCAGTTGCGTGAAGCGAAAAAAGAC TTAACCGAAGAGTTAGAGATCTTAGAAGCAGGTTTATTTACCCGTGTTCGTAACTTATTGATTGAAGGTGGCGTACAAGA ATCGGTATTAGATAGCTTACCTCGTGAAAAATGGTTAGAACAAACCTTAGATGACGAAGCGAAACAAAACCAACTTGAAC AGCTTGCGGAACAGCACGAAGAGTTACGCAAAGAGTTTGAGCGTAAATTAGAAATTAAACGCAATAAGATCATTCAAGGC GATGATTTAGCACCGGGTGTGATGAAAGTGGTGAAAGTTTACCTCGCGGTGAAACGCCAAATTCAACCGGGTGATAAAAT GGCAGGTCGTCACGGTAACAAAGGTGTTATTTCGAAAATCAACCCAGTTGAAGATATGCCATACGATGAAAACGGCCAAC CAGTTGAAATCGTATTGAACCCACTGGGTGTACCATCTCGTATGAACATCGGTCAGATCTTAGAAACCCACCTAGGCTTA GCGGCTCGTGGTATCGGTGATCAAATCGACAAGATGATCAAACAGCAGCAAGAAGTGGCGAAACTGCGTGAATATATCCA AAAAGCGTATGATTTAGGTCACGGTGCACAATCTGTTGATTTAAGTACCTTCTCTGATGAAGAAGTGATGCGTTTAGCGC AAAATTTACGTAAAGGCTTACCGCTTGCAACACCAGTATTTGATGGTGCACATGAAAGCGAAATTAAAGGCTTATTGGAG CTAGGTGGCTTACCAACTTCAGGTCAGATCACCCTTTACGATGGCCGTACAGGTGAGAAATTCGAGCGTCCTGTAACCGT AGGTTATATGTATATGCTCAAATTGAACCACTTAGTTGATGACAAAATGCACGCACGTTCAACAGGTTCTTATAGCCTTG TTACCCAACAACCACTGGGTGGTAAAGCACAGTTCGGTGGTCAGCGTTTTGGTGAGATGGAGGTTTGGGCATTAGAAGCA TACGGTGCAGCTTATACCTTACAAGAAATGCTAACAGTGAAATCCGATGACGTGAACGGTCGTACGAAGATGTATAAAAA CATCGTGGACGGTACACACTATATGGAACCGGGAATGCCAGAATCATTCAACGTAATTACCAAAGAGATCCGTGCACTGG GTATCGATATGGAGTTGGATGAGGCGTAA Protein sequence : MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFDKFIQRDPEGQQGLEAAFRSVFPIVSQNGATELQYVSYELGEPAF DVRECQIRGTTYAAPLRVKLRLVSFDREAAAGTVKDIKEQSVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD KGKTHASGKVLYNARIIPYRGSWLDFEFDPKDNLYARIDRRRKLPATIILRALGYTTEEILNLFFDKVLFEISDNQLLMT LVPERLRGETAAFDIEANGKVYVESGRRITARHIKALEKDNITQIVVPTEYIVGKVTAKDYIDLETGEIVCPANMEISLE LLAKLAQAGYNQIEVLFTNDLDHGAYISETLRIDPTYDRLSALVEIYRMMRPGEPPTKEAAEGLFDNMFFSTDRYDLSAV GRMKFNRSLDIPEGVGTGILSHDDIIGVMKKLIEIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVRERLS LGDLDGVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHTTHYGRLCP IETPEGPNIGLINSLSVYARTNNYGFLETPFRKVVNGQVTEEIEYLSAIEEGNYVIAQANSNLDENFRFTDTYVTCRGEH GESGLYRPEEIHYMDVSTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAVVAK RGGTIQYVDASRIVVKVNEDETVAGEAGIDIYNLIKYTRSNQNTCINQIPCVKLGEPVERGEILADGPSTDLGELALGQN IRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVKG GDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKDIEEMQLREAKKD LTEELEILEAGLFTRVRNLLIEGGVQESVLDSLPREKWLEQTLDDEAKQNQLEQLAEQHEELRKEFERKLEIKRNKIIQG DDLAPGVMKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGL AARGIGDQIDKMIKQQQEVAKLREYIQKAYDLGHGAQSVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLE LGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEA YGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGMPESFNVITKEIRALGIDMELDEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 70 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 85 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 85 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 84 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 84 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 84 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 84 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 70 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 65 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 63 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 63 |
| WQG_22070 | YP_007549275.1 | DNA-directed RNA polymerase subunit beta | NC_012469.1.7686402. | Protein | 6e-177 | 46 |
