Gene Information

Name : ccmF (AZKH_0315)
Accession : YP_007549637.1
Strain : Azoarcus sp. KH32C
Genome accession: NC_020516
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 364051 - 366024 bp
Length : 1974 bp
Strand : +
Note : -

DNA sequence :
ATGATTCCCGAACTTGGTCATTTTTCCCTGATTCTGGCTTTTGTCGTCGCGCTGGTGCAGGCGGTCGTACCCCTCATCGG
TGCGAGCCGCAACCGCCTCGCGCTGATGTCCGTGGGCCGCTCGGCCGCGCAGGGACAGTTCCTGTTCATCCTCTTTTCCT
TCGGATGCCTGACCTGGTCCTTCGTCACCAGCGATTTCTCGCTGCAACTGGCGGCAACCAACTCGCACTCCGAGACTCCG
ATGATCTACAAGATCACCGGCGTGTGGGGCAACCATGAAGGCTCCCTGCTGCTGTGGGCACTGGCCTTGTCGCTGTGGAC
CGTCGCCGTCACGATCTTCAGCCGCAACCTGCCCGAGATCTTCATGGCGCGCGTCGTCGGCGTGCTGGGCTGCGTTAGCG
CGGGCTTCCTGTCCTTCCTGCTGGTCACCTCCAATCCCTTCGACCGCATCCTTCCCGGAGCCGCCGAAGGCCGCGACCTG
AACCCGCTGCTGCAGGATCCCGGGATGATCATCCATCCACCGCTGCTCTACATGGGCTACGTCGGCTTCTCGGTGGCTTT
CGCCTTCGCCATCGCTGCGCTGCTGTCCGGCCGCATGGACGCGGCTTGGGCACGCTGGTCGCGCCCCTGGACGACGGTCG
CGTGGATCTTCCTCACCTGTGGCATCACCGTCGGTTCGGGCTGGGCCTACTACGAGCTTGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTCGAAAACGCCTCGTTCATGCCGTGGCTGGCCGGCACCGCGCTGATGCACTCGCTCGCCGTCACCGAAAA
GCGGGGTGCCTTCCGCAGCTGGACGGTGCTGCTCGCGATCGCCGCCTTCTCGCTGTCGCTGATGGGGACCTTCCTCGTGC
GTTCGGGCGTCCTGACCTCGGTCCATGCCTTCGCGACCGACCCCGCACGCGGCATGTTCGTCCTGGCACTGCTCGTCCTC
GTGATCGGCGTGTCGCTGGTACTATTCGCATGGCGTGCCCCGACGCTCGCCGGCGGCGGCAGCTTCAGCCTGATTTCGCG
CGAATCCGCACTGCTGGGCAACAACGTCCTGCTGTCCGTGGCGTCGGGCTCGGTGTTGCTCGGCACGCTGTACCCGCTCT
TCGTCGACGCCCTCGGCCTCGGCAAGATCTCGGTCGGTCCGCCGTACTTCGAGGCGGTCTTCGTGCCCTTGATGACGCCG
GTGATCGTTCTGATGATGATCGGGCCGATCGTCCGCTGGAAGGGTGATGATGGCGCCAGGATCCTGCGCAAGGTCGTCGT
CCCGCTGCTCGTCAGCGTCATCATCGGCGTCGGCGTGTCCTTCGCTGTCGGCCACGTCTCCGTGCGCACGGTCCTGGGCC
TGTCGCTGGCTGCCTGGGTGCTCATCGGAAGCGTCCAGACCCTGCTGCAGCGCCTGGCTGATCGTCCGGGCGCAGCGACC
GGCACCCGCTTGCGCGGCATCCCCGGCGCGTGGTGGGGCATGTGGTTCGGCCACCTCGGCATCGGCGTGTTCATTATCGG
CGTGACCCTGGTCGGAAGCCTGAACACCCAGATCCAGGTCAAGATGCATCCGGGCGACACCGCGCAACTTGCCGGCTACA
CCTTCAGCTTCCGCGGCATCGCCGATGCTCCGGGCCCCAACTACGCGGCTGCGCGCGGCACCCTCGACGTCACGCGCGAC
GGACATAAGGTCGCGACGCTCACCCCCGAAAAGCGCGTCTATCTGGCCCAGCAGATGCCGATGACCGAAGCCTCGATCGA
CATCGGCCTGTTCCGCGACGTCTACGTGAATCTCGGCGAACAGCTCGAAGACGGTGCGTGGGTCGTCGGCCTCTTCTATC
GTCCGTTCATCAGCTGGGTCTGGTTCGGCTGCATCATCATGGCCATCGGTGGCATCTTCGCCGCCGCCGACCGTCGTTAT
CGTCGCCTCGCTGAACGCGCCGCCCCCGCGGCGGCTGCGCGTCAGGTTGCCTGA

Protein sequence :
MIPELGHFSLILAFVVALVQAVVPLIGASRNRLALMSVGRSAAQGQFLFILFSFGCLTWSFVTSDFSLQLAATNSHSETP
MIYKITGVWGNHEGSLLLWALALSLWTVAVTIFSRNLPEIFMARVVGVLGCVSAGFLSFLLVTSNPFDRILPGAAEGRDL
NPLLQDPGMIIHPPLLYMGYVGFSVAFAFAIAALLSGRMDAAWARWSRPWTTVAWIFLTCGITVGSGWAYYELGWGGWWF
WDPVENASFMPWLAGTALMHSLAVTEKRGAFRSWTVLLAIAAFSLSLMGTFLVRSGVLTSVHAFATDPARGMFVLALLVL
VIGVSLVLFAWRAPTLAGGGSFSLISRESALLGNNVLLSVASGSVLLGTLYPLFVDALGLGKISVGPPYFEAVFVPLMTP
VIVLMMIGPIVRWKGDDGARILRKVVVPLLVSVIIGVGVSFAVGHVSVRTVLGLSLAAWVLIGSVQTLLQRLADRPGAAT
GTRLRGIPGAWWGMWFGHLGIGVFIIGVTLVGSLNTQIQVKMHPGDTAQLAGYTFSFRGIADAPGPNYAAARGTLDVTRD
GHKVATLTPEKRVYLAQQMPMTEASIDIGLFRDVYVNLGEQLEDGAWVVGLFYRPFISWVWFGCIIMAIGGIFAAADRRY
RRLAERAAPAAAARQVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 5e-146 56
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 2e-118 54