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Name : clpB (SM2011_c02433) Accession : YP_007575885.1 Strain : Sinorhizobium meliloti 2011 Genome accession: NC_020528 Putative virulence/resistance : Virulence Product : putative ATP-dependent protease (heat shock protein) Function : - COG functional category : - COG ID : - EC number : - Position : 2813763 - 2816369 bp Length : 2607 bp Strand : - Note : corresponds to SMc02433 DNA sequence : ATGGATATCGAAAAATATTCGGAACGCGTCCGCGGTTTCCTGCAGTCGGCCCAGACCTATGCGCTGGCCGAAGGGCACCA GCAATTTACGCCGGAGCACGTTCTCAAGGTATTGCTCGACGACGATCAGGGCATGGCGGCTTCGCTTATCGAGCGCGCCG GCGGCAATGCGCGGGAAGCCAAGGTCGGTACGGCCGCAGCTTTGGCGAAGCTTCCGAAGGTGACCGGCGGCAACGGCTCG GTCTATCTGTCGCAGCCGCTCGCCAAGGTTTTCACCGCAGCCGAAGATGCGGCCAAGAAGGCCGGCGACAGCTTCGTAAC CGTCGAACGCCTGCTCCTGGCGCTGGCGATCGAAAGCTCGGCCGCGACGGCGTCGATCCTCTCCAAGGCCGGCGTCACGC CGACGAAGCTCAACCAGGTCATCAACGAAATCCGCAAGGGCCGCACCGCCGACAGCGCCAATGCCGAACAAGGCTTCGAT TCGCTCAAGAAATATGCGCGCGATCTGACCGCCGAGGCGAGGGAAGGCAAGCTCGATCCGGTGATCGGCCGCGACGACGA GATTCGCCGAACGATCCAGGTGCTCTCGCGCCGGACGAAGAACAATCCCGTGCTGATCGGCGAGCCGGGCGTCGGCAAGA CCGCCATCGCGGAAGGCCTGGCGCTCAGGATCGTCAACGGCGATGTGCCTGAAAGCCTGAAGGACAAGCGCCTGATGGCG CTCGACATGGGCGCGCTGATCGCCGGTGCGAAGTTCCGCGGTGAATTCGAAGAGCGGCTCAAGGCCGTGCTGAACGAAGT GCGCTCGGAAGGTGGCGAGATCATCCTCTTCATCGATGAAATGCACACACTGGTCGGTGCAGGCAAGGCGGACGGGGCTA TGGATGCCTCGAACCTCCTGAAGCCCGCGCTTGCCCGCGGCGAACTGCACTGCGTCGGCGCGACGACGCTCGACGAATAC CGCAAGCATGTCGAGAAGGACGCAGCCCTTGCCCGCCGGTTCCAGCCGGTGATGGTCGAGGAACCGACGGTCGAGGATAC GATCTCGATCCTGCGCGGCCTGAAGGAAAAATACGAGCAGCACCACAAGGTGCGGATCTCCGATTCCGCGCTGGTTGCGG CTGCGGCACTTTCCAACCGCTACATCACCGATCGTTTCCTTCCGGACAAGGCGATCGACCTCATGGACGAGGCAGCCTCG CGCCTCAGGATGCAGGTCGATTCGAAGCCGGAAGAACTCGACGAACTCGACAGGCGCGTCATTCAACTGAAGATCGAACG TGAGGCCTTGAAAAAGGAGACCGACGTTTCCTCCAAGGATCGCCTTGCCAAGCTCGAACTCGATCTGTCTTCGCTCGAAG AGGAGGCAGCCGCATTGACGGCGCGCTGGCAGGCCGAGAAGCAGAAGCTCGGGCAGGCCGCCGATCTCAAGAAACAGCTC GACGAAGCGCGCAACGAGCTGCAGATCGCACAGCGCAAGGGCGAATTCCAGCGGGCAGGGGAGCTTGCCTACGGGGTGAT CCCGAATCTCGAAAAGGAACTGGCCGAAGCGGAAAGCCAGGATGGTGCCAGCGCCAACCCGATGGTGCAGGAGGTCGTGA CCCCTGACAACATCGCCCATATCGTGTCACGCTGGACCGGCATTCCGGTCGACAAGATGCTGGAAGGCGAGCGCGACAAG CTGCTCAGGATGGAAGACGAGCTGGCGAAATGGGTCGTCGGTCAGGGTGATGCCGTGCAGGCTGTCTCGCGGGCGGTTCG CCGTTCGCGCGCAGGGCTTCAGGATCCGAACCGGCCGATCGGCTCCTTCATCTTCCTGGGTCCGACCGGCGTCGGCAAGA CGGAGCTCACCAAGGCGCTTGCCCGCTTCCTCTTCGACGACGAAACCGCGCTGATGCGGATCGACATGTCCGAGTACATG GAGAAGCATTCGGTCGCCCGCCTGATCGGCGCGCCTCCCGGCTATGTCGGTTACGAGGAGGGTGGGGCGCTGACGGAATC GGTCCGCCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGATGTCTTTAACGTGCTTCTGC AGGTGCTTGACGATGGGCGTCTGACCGATGGTCAGGGGCGCACGGTCGACTTCAAGAACACGATGATCATCATGACCTCC AACCTCGGTGCGGAATACCTGACCGCACTCGGCGAAAACGAGGACAGCGATGCGGTTCGCGATCAGGTCATGGAAGTGGT GAGAGCCGCTTTCCGTCCGGAATTTCTGAACCGCGTCGACGAGATCATACTGTTCCACCGGCTGCGCCGCTCGGAAATGG GCGCGATCGTCGACATTCAGCTCGAAAGGCTGCGCAAGCTCCTCTCGGATCGCAAGATCACGCTCGAGCTCGAGGACGAT GCCCGCGTTTTCCTGGCGGACAGGGGCTACGATCCGGCCTACGGCGCTCGCCCCCTGAAGCGGGCGATCCAGAAATACGT TCAGGACCCGCTGGCCGAAAAAGTGCTGCAGGGCGAGTTCCCGGATGGCTCGGTGATCAAGGTCGTTGCCGGTTCCGACC GTCTGAACTTCAAGCGCGGGGCAGGGGCGAACAAGGAAGCCGCGTAA Protein sequence : MDIEKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAKVGTAAALAKLPKVTGGNGS VYLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFD SLKKYARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMA LDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAAS RLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQL DEARNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDK LLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYM EKHSVARLIGAPPGYVGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTS NLGAEYLTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDD ARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPDGSVIKVVAGSDRLNFKRGAGANKEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-104 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007575885.1 | putative ATP-dependent protease (heat shock protein) | VFG2076 | Protein | 4e-117 | 43 |
| clpB | YP_007575885.1 | putative ATP-dependent protease (heat shock protein) | VFG2084 | Protein | 1e-104 | 42 |
