Gene Information

Name : R2APBS1_2394 (R2APBS1_2394)
Accession : YP_007590725.1
Strain : Rhodanobacter sp. 2APBS1
Genome accession: NC_020541
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2549965 - 2550723 bp
Length : 759 bp
Strand : +
Note : PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC

DNA sequence :
ATGTCTGACTGGATTCCGCTCTGGTTGCACAAGCTCAGCTCGCCGCCGACGTTCTACCGCTTCGCAGGCGCGCTGCAGCC
GTGGGCAATGGGCCTGGCCCTGCTGCTCGGTGCAGTCGCGCTGTACGGCGGCCTGGTGCTGGCGCCGGCCGACTACCAGC
AGGGCGACGCCTACCGCATCATCTTCATCCACGTGCCCAGCGCGTGGATGAGCATGTTCATCTACGCGGTGATGGGCGCG
GCCTCGTTCGTCGCACTGGTGTGGCGGATCAAGCTGGCCGAGGTGGTGGCGATGGAGTCGGCGCCGATCGGTGCCGCATT
CACCTTCATCACCCTGGTCACCGGCTCCTTGTGGGGCAAGCCGATGTGGGGCACCTGGTGGACCTGGGACGCACGGCTCA
CCTCCGAGCTGGTGCTGCTGTTCCTGTTCCTCGGCGTGATCGGGCTGTACCACGCGTTCGAGGACCGCCGCCAGGGCGCG
CGCGCCGCGGCCTTCCTCGCCATCATCGGCATCATCAACGTGCCGATCGTGCATTTCTCGGTGAACTGGTGGAACACCCT
GCACCAGGGCAGCACGGTCAACCTGTTTGGCCAGTCGAAGATCTCCGCCGCCATGCTGTGGCCGCTGCTGACGATGACCC
TGGCGACCAAGTTCTACTATGCCGCCAGCCTGTTCCGCCGCGCTCGCACTGATCTGCTGGCGCTGGAAGGCGGCAAGGAC
TGGGTGCGCAAGATCGCCGAAGACGAGGCCGACCGATGA

Protein sequence :
MSDWIPLWLHKLSSPPTFYRFAGALQPWAMGLALLLGAVALYGGLVLAPADYQQGDAYRIIFIHVPSAWMSMFIYAVMGA
ASFVALVWRIKLAEVVAMESAPIGAAFTFITLVTGSLWGKPMWGTWWTWDARLTSELVLLFLFLGVIGLYHAFEDRRQGA
RAAAFLAIIGIINVPIVHFSVNWWNTLHQGSTVNLFGQSKISAAMLWPLLTMTLATKFYYAASLFRRARTDLLALEGGKD
WVRKIAEDEADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-39 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R2APBS1_2394 YP_007590725.1 heme exporter protein CcmC VFG1856 Protein 2e-46 50