Gene Information

Name : D805_0792 (D805_0792)
Accession : YP_007593499.1
Strain : Bifidobacterium thermophilum RBL67
Genome accession: NC_020546
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 989815 - 990627 bp
Length : 813 bp
Strand : +
Note : 'COG1136 ABC-type antimicrobial peptide transport system, ATPase component'

DNA sequence : 
ATGACAACCCCGAATCCCATAGCCGTCGAAGCTGTCGACCTGGTGAAGATCTATGGTACCGGCGAAAACGCGGTCCACGC
GCTGCGCCATGTCAATGTCGCATTCGAACGAGGGAAGTTCACCGCTATCATGGGTCCGTCCGGTTCCGGCAAGTCCACGC
TCATGCACACCCTGGCAGGCCTTGATTCGGTGACCAGCGGCCATATCCTGCTCGACGGCGCCGATATCACTACGATGAAC
GACAAGCAGCTGACCCTGTTGCGCCGTCACAAGATCGGCTTCATTTTCCAGAGTTTCAACCTGCTGCCGATGTTCACCGC
CGAGCAGAACATCCTGATGCCGTTGACCCTTGCCGGACAGAAGCCTGACCGCAAGTGGTTCGACATGCTGGTGGACACCC
TAGGATTGCGTGAACGTCTCGGCCACCGTCCGAACGAACTGTCCGGCGGCCAGCAGCAGCGAGTCGCCATCGCACGCGCG
CTCATCAGCAAGCCGTCGGTCGTGTTCGCGGATGAACCGACCGGTAATCTCGACTCGGTTTCCAGCGCGGAAGTGCTGAG
CTTCCTCAAACGTTCGGTCAAGGAGCTGGGACAGACCATCATCATGGTCACGCATGATGCGGTCGCCGCCTCCTATGCGG
ATCGCGCCATCGTCTTCGCTGACGGTCAGATCGTCGCCGATGTCGAACATCCCAGCGCCGACCAGATGAGTGAACTGCTC
ATGCAGGAACGCCGTCGCGCCACACTCAATCTGTCCGAAGGCGTGCCGCTGCCGCCTGCTGCCGCCATGTCGTGTGCCGG
CATCCAACGCTGA

Protein sequence : 
MTTPNPIAVEAVDLVKIYGTGENAVHALRHVNVAFERGKFTAIMGPSGSGKSTLMHTLAGLDSVTSGHILLDGADITTMN
DKQLTLLRRHKIGFIFQSFNLLPMFTAEQNILMPLTLAGQKPDRKWFDMLVDTLGLRERLGHRPNELSGGQQQRVAIARA
LISKPSVVFADEPTGNLDSVSSAEVLSFLKRSVKELGQTIIMVTHDAVAASYADRAIVFADGQIVADVEHPSADQMSELL
MQERRRATLNLSEGVPLPPAAAMSCAGIQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D805_0792 YP_007593499.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-49 51
D805_0792 YP_007593499.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-51 47
D805_0792 YP_007593499.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-39 46
D805_0792 YP_007593499.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-44 44