Gene Information

Name : ETAC_16010 (ETAC_16010)
Accession : YP_007630683.1
Strain : Edwardsiella tarda C07-087
Genome accession: NC_020796
Putative virulence/resistance : Virulence
Product : integral membrane sensor signal transduction histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3617516 - 3618982 bp
Length : 1467 bp
Strand : -
Note : COG0642 Signal transduction histidine kinase

DNA sequence :
ATGAGCCGCCTGAGCCTGTCGCAGCGTCTGGCGCTGGTGTTTGCCCTGCTGCTGCTGGTGTGCAGCGCCCTAACCGGTTG
GCTGCAGCTGCGCAGTAATACGCAGTATAGCCAGCAGGTGATCCAGCGCCTGTCCGCGAACCTGGCGCGTCATATCGCCG
AGCATAACCCGCTGCTGCAGGCCGACGGCCTGAATCCGGCGTCGGTAAAAAACCTGTTCGATCAGCTGATGGCGGTGAAT
CCCAGCGTGGAGGTCTATCTGCTGGATGAGCAGGGGCGGATCATCGGCGATGCGGCGCCGCCGGGGCGCATCGTGCGCCA
TCAGGTCAGTCTGGCGCCGATCGCGGCGTTTCTGGCGGGAAAACCGCTGCCGCTGTACGGCGACGACCCGCGCAGCCCGG
ATGCCCGTAAGGTGTTTAGCGCCGCGCCGCTGTCGCTGAACGGCCATCCGCGCGGCTATCTGTATGTGGTGCTGCTGGGA
GAGAACTACAACCGGCTGAGCGACGACGTTCGCTTCGGCTCCGCCTGGCGCATGGCCGGCTGGTCGATAGCCCTGATCCT
GATCTGTGGGCTGCTGGCCTGGCTGCTGGTCTACCGCTGGGTCACCCGCCCGGTTCACGCCCTGACGCGTCAGGTGGGGC
GTCTGGAGCGCGAGGGGCTGGAGACCGCGCAGCCGGCGACGCTGACCGCGCTGCAGCAGATCCGTGGCGAGGATGAGGTC
GCCCAGCTGCAGCGGGCGTTTGGCCGCATGGCGCGCCGGATCACCGAGCAGTGGCAGCGTTTGGCCGATCAGGATCGCCA
GCGGCGCGAGTTTATCACCACCGTCTCTCACGATCTGCGCACGCCCCTCACGTCGCTGCATGGCTATCTGGAGACGCTGA
GCCTGAAGCGGAATACCCTGAGCGCCGCCGATCGACGGCGTTACCTGGATACGGCGCTGGCCCAAAGCCAGAAGGTCGGG
CGTCTGGCGCAGCAGCTGTTTGAGCTGGCGCGCCTGGAATACGGTGCGGTGAAGCCGCAGCGTGAGCCTTTCTCTTTTAG
CGAGCTGCTGCAGGATGTGTTTCAGAAGTTTGAGCTGGCGGCCGAGGCCCGCGGCCTGACGCTGAGCGCCGACGTCGCGA
CCGGTTTACCGCTGATCTCGGCGGATATCCATATGATGGAGCGGGTACTGACCAACCTGCTGGATAACGCCATACGCCAT
ACGCCGCAGGAGGGGCGTATCGTCGTGCGCCTATGGCAGGAGGAGCGGCGGCTGTGGGTCGAGCTGTGCGACAGCGGCCC
CGGCGTCCCCGATGGGCTGCGCAGCGCGTTGTTCCAGCGGCCGCTGTCATCCAGCGGGACGCGTTACGGCACCGGCGGGC
TGGGGCTGCTGATCGTAAAACGGATGCTGGAGCTGCACGGCGGGGATATCGCCCTGATCGCGCGACAGCGACAGGGCGCC
TGTTTCCGCCTATCGCTGCCGCTGTAG

Protein sequence :
MSRLSLSQRLALVFALLLLVCSALTGWLQLRSNTQYSQQVIQRLSANLARHIAEHNPLLQADGLNPASVKNLFDQLMAVN
PSVEVYLLDEQGRIIGDAAPPGRIVRHQVSLAPIAAFLAGKPLPLYGDDPRSPDARKVFSAAPLSLNGHPRGYLYVVLLG
ENYNRLSDDVRFGSAWRMAGWSIALILICGLLAWLLVYRWVTRPVHALTRQVGRLEREGLETAQPATLTALQQIRGEDEV
AQLQRAFGRMARRITEQWQRLADQDRQRREFITTVSHDLRTPLTSLHGYLETLSLKRNTLSAADRRRYLDTALAQSQKVG
RLAQQLFELARLEYGAVKPQREPFSFSELLQDVFQKFELAAEARGLTLSADVATGLPLISADIHMMERVLTNLLDNAIRH
TPQEGRIVVRLWQEERRLWVELCDSGPGVPDGLRSALFQRPLSSSGTRYGTGGLGLLIVKRMLELHGGDIALIARQRQGA
CFRLSLPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-98 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAC_16010 YP_007630683.1 integral membrane sensor signal transduction histidine kinase VFG1701 Protein 2e-98 50