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Name : secD (ETAC_04575) Accession : YP_007628406.1 Strain : Edwardsiella tarda C07-087 Genome accession: NC_020796 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1056772 - 1058628 bp Length : 1857 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGATCGTGGCGCTGGTCATCGGTCTGCTGTATGCGCTCCCTAA CCTTTATGGCGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGTGTCGCCGCCAGTGAGTCAACACTGGTCCAAGTCC GTGATGTGCTTGAAAAACAGCATATCCCCAGCAAATCCATTGCGCTGGAAAATGGTGCCATTCTGGCACGCTTTACTGAT ACCGACATTCAGCTGCGGGCGCGCGAAGCGCTGGTCGATACGCTGGGTGATAAATATGTCGTCGCACTCAACCTGGCACC CGCTACCCCGAAGTGGCTGGCGATGGTCGGCGCCGAGCCGATGAAGCTGGGTCTTGACCTGCGCGGCGGCGTGCATTTCC TGATGCAGGTGGACATGGATACTGCGCTGAGCAAGCTGCAGGAACAGACCATGGATACCCTGCGCAGCGATCTGCGCGAC AAAGGCATTCCTTACTCTACCATCCGTAAGCTGCCCGATCCCGCCAGCGGAGGCGTGGAGATCAACTTCCGTGACGCCGC CGCCCGCGATGCGGCCAGCAATTACCTCTCTCCGCGCCACCGCGATCTGGTCTTCAGCAACGCCGGTGATACGACGCTGA AAGCGGTGATGACGGACGATCGCCTGCGTGAGGCCCGTGAGTATGCGGTGCAGCAGAACATCAACATTCTGCGTAACCGT GTGAACCAGCTAGGCGTTGCAGAGCCGCTGGTACAGCGCCAGGGCGCCGATCGTATCGTGGTTGAGCTGCCGGGTATCCA GGACACGGCGCGTGCCAAGGAGATTCTGGGTGCGACCGCGACGCTGGAGTTCCGTCTGGTCAACAGCAACGTGGATGCGC AGGCCGCCGCCAGCGGTCGCGTACCGGGTGACTCTGAGGTCAAATATACCCGTGACGGCCGCCCGGTGGTGCTGTACAAG CGGGTGATCCTGACCGGTGACCATATCACTGACTCCACCTCCAGCCAGGATGAGTTTAACCGTCCGCAGGTTAACATCTC CCTCGACAGCGCCGGCGGCAGCGCCATGTCCAACTTCACCAAGGACAATATCGGCAAGCCGATGGCGACCCTGTTTGTGG AATATAAGGACAGCGGCAAGAAAGACGCCAGCGGCAAGCCGATCCTGGAGAAACAGGAAGAGGTGATCAACGTGGCGACG ATCCAGTCGCGCCTGGGTAACAGCTTCCGGATTACCGGCATCGATAACCCGGCTGAGGCCCGTCAGCTCTCTCTGCTGCT GCGCGCCGGTGCGCTGATTGCGCCGATCCAGATCGTGGAAGAGCGGACTATCGGCCCAACCCTGGGGATGCAGAACATTG AGCAGGGGCTCGAAGCCTGCCTGTGGGGCCTGGTCGCCTCTATCATCTTCATGGTGGTGTACTACAAGAAGTTCGGTCTG ATCGCGACCACCGCGCTGTTGGCTAACCTGGTGATGATCGTCGGGATTATGTCGCTGCTGCCGGGGGCCACGCTGACCAT GCCGGGCATTGCGGGGATCGTGCTAACCCTTGCGGTAGCGGTTGACGCCAACGTACTGATAAACGAGCGTATCAAGGAGG AGCTGCGCAACGGGCGAACCGTTCAGCAGGCGATCCATGAAGGCTATAAAGGCGCGTTTTCCAGTATTATCGATGCCAAC GTGACCACGCTGATTACCGCAGTGATCCTGTACGCCGTGGGCACCGGCTCCATCAAGGGCTTTGCCATCACCACCGCTAT CGGTGTGGCGACCTCGATGTTTACCGCCATTGTCGGTACCCGCGCCATTGTCAACCTGCTGTACGGCGGCAAGCGCATCA ACAAGCTGTCTATCTAA Protein sequence : MLNRYPLWKYIMLIVALVIGLLYALPNLYGEDPAVQITGARGVAASESTLVQVRDVLEKQHIPSKSIALENGAILARFTD TDIQLRAREALVDTLGDKYVVALNLAPATPKWLAMVGAEPMKLGLDLRGGVHFLMQVDMDTALSKLQEQTMDTLRSDLRD KGIPYSTIRKLPDPASGGVEINFRDAAARDAASNYLSPRHRDLVFSNAGDTTLKAVMTDDRLREAREYAVQQNINILRNR VNQLGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDAQAAASGRVPGDSEVKYTRDGRPVVLYK RVILTGDHITDSTSSQDEFNRPQVNISLDSAGGSAMSNFTKDNIGKPMATLFVEYKDSGKKDASGKPILEKQEEVINVAT IQSRLGNSFRITGIDNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLWGLVASIIFMVVYYKKFGL IATTALLANLVMIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRTVQQAIHEGYKGAFSSIIDAN VTTLITAVILYAVGTGSIKGFAITTAIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-128 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-128 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-128 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-128 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-128 | 47 |
