Gene Information

Name : XAC29_11150 (XAC29_11150)
Accession : YP_007636648.1
Strain : Xanthomonas axonopodis Xac29-1
Genome accession: NC_020800
Putative virulence/resistance : Virulence
Product : hemolysin secretion protein B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2601108 - 2603390 bp
Length : 2283 bp
Strand : -
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGTCGGAAGGGAAAATCGTTCCTCAGGCCCAGGGCGGGCCGGGGCTGCAGGCACTGCAATCGCTTTGCCTGATCGCCAG
GCTGCACCAGGTGGCGGCGGACCCGGCGGCGCTGGCGCACCAGCTGGGCCTGTCGCCGAGCGAGCCGGTGGACGTGCCGG
ATCTGTTGCGGGCCGCGAAGAGCCTGGGACTGAAGGCGCGCAAAGTGTCGTGCGGCGTGGAGCGGCTGGCACTGACACCC
TTGCCCGCGCTGGCCTTGCTGCGAGAGTCCATGCGAGAGCCCGACCGCGAGCCAGGGGTTGCGGGCGAGGGCAACGACGC
CCCTCGCCATGGCGTTCGCACCGCCGTGCTCGCGCAATGCGATGGCCAGCGTGTGCTGCTGCAGGAGCCCGGGGAGAGCG
CGTCGGCCGGACGTCCGGTGATCGAGCCCGTCGAAGAGTTCGCCAAGCGCTGGACGGGTGATCTCATTCTCGTGAGCGGC
CGCGCGAGCCTGGCGGGCGAACTGGCCCGTTTCGACTTCTCGTGGTTCATCCCGAGCCTCATCAAGCATCGGCGACTGCT
GGGGGAGGTCCTGCTCATCTCCTTCATGCTGCAGCTCTTCGCCCTGGTGAGCCCGCTCTTCTTCCAGGTCGTGATGGACA
AGGTGCTGGTGCACCGAGGACTCACCACGCTGGACGTGCTGGTCGGCGGGCTCGTGGTGGTGGTCGTCTTCGAGAGCCTG
CTGAACGGCCTGCGCGGCTACGTGTTCAGCCACACCACCAGCCGCATCGATGTGGAACTCGGCGCGAAGCTGTTTCGGCA
TCTCGTGCAGCTGCCGCTTGCCTACTTCCAGTCGCGCCGCGTGGGCGACTCGGTGGCGCGCATGCGCGAGCTGGAGAACA
TCCGGGGTTTTCTCACCGGTAACGCGCTCACCGTGGTGCTGGATGTCCTGTTCTCGGTGGTCTTCATTGCGGTGATGGTG
ATGTACAGCGTTCCGCTCACGCTCATCGTGCTCGCGAGCCTTCCGCTGTATTTCGGGCTGAGCCTGGCCGTGGTGCCGGT
GCTGCGGCGGCGCCTGGACCAGAAGTTCGCGCTCGGCGCCGAGAACCAGGCCATGCTCGTGGAGACCGTCACCGGCATCC
AGACCGTCAAGGCGAGCGCCCTGGAGCCCTCGTTCGCGCGGCGCTGGGACAACCAGCTCGCGGCCTACGTCAGCGCCAGC
TTCAAAACCCAGAACCTGGCCGCTTGGGCGCACGAGGGCGTGAACCTGATCGGCAAACTGGTGAACGCGGCCACCCTGTG
GTGGGGCGCGCACCTGGTCATGGACGGCCAGCTCAGCGTGGGCCAGTTCGTCGCCTTCAACATGTTCGCGCAGCGCGTGG
CGCAGCCCATCATGCGCATGGCGCAGCTATGGACGGACTTCCAGCAGACGGGCATCTCCATGGCCCGGCTGGGCGACATC
CTCAATACCCGCACCGAGGTGCCCGCCACCAGCGCCGCGCAGTTGCCAGCCCTGCGCGGGCGCGTCACGCTCGATGGCGT
GCACTTCCGCTACCGGCCCGAGGCCGTGCCGGTGCTCTGCGGCGTGCAACTGGACATCCGCCCCGGCGAGGTCATCGGCA
TCGTGGGCCGCTCGGGCTCGGGCAAGAGCACCCTGACCAAGCTCGTGCAGCGCCTCTACGTGCCCGAGCAGGGCCGCATC
CTGGTGGACGGCATCGACATCAGCCTGATCGATGCCGCGCAGCTGCGGCGGCAGGTGGGCGTCGTGCTGCAGGAGAACCT
CCTCTTCAACCGCAGTGTGCGCGAGAACATCGCCATCGCCGATCCTGCAGCACCCATCGAGGCCGTGGTGCATGCGGCGC
GGCTGGCGGGCGCGCACGATTTCGTGAGCGAGCTGCCCGAGGGCTACGACACACTCGTGGGCGAGCAGGGCGGCAGCCTC
TCGGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGGGCGCTGTTCACCAACCCGCGCATCCTCATCCTCGACGAGGCCAC
CAGCGCGCTCGACTACGAGAGCGAGGCCATCATCCAGCGCAACATGGCGCACATCTGCGAGGGCCGCACCGTGCTCATCA
TCGCCCACCGCCTCTCGGCCGTGCGCCAGGCCCACCGCATCATCGTGATGGACAAGGGGCGCATCGTGGAGGCCGGCCCG
CACGACGCGCTCATCCAGCGCCCGCAGGGGCTCTACGCCCACCTGTGGCGCATGCAGGACGGGGGCGGCGGCACGGTTCC
AATGACTCGCACTGGTCCGCGCACCGAGGAGGTGGTGGCATGA

Protein sequence :
MSEGKIVPQAQGGPGLQALQSLCLIARLHQVAADPAALAHQLGLSPSEPVDVPDLLRAAKSLGLKARKVSCGVERLALTP
LPALALLRESMREPDREPGVAGEGNDAPRHGVRTAVLAQCDGQRVLLQEPGESASAGRPVIEPVEEFAKRWTGDLILVSG
RASLAGELARFDFSWFIPSLIKHRRLLGEVLLISFMLQLFALVSPLFFQVVMDKVLVHRGLTTLDVLVGGLVVVVVFESL
LNGLRGYVFSHTTSRIDVELGAKLFRHLVQLPLAYFQSRRVGDSVARMRELENIRGFLTGNALTVVLDVLFSVVFIAVMV
MYSVPLTLIVLASLPLYFGLSLAVVPVLRRRLDQKFALGAENQAMLVETVTGIQTVKASALEPSFARRWDNQLAAYVSAS
FKTQNLAAWAHEGVNLIGKLVNAATLWWGAHLVMDGQLSVGQFVAFNMFAQRVAQPIMRMAQLWTDFQQTGISMARLGDI
LNTRTEVPATSAAQLPALRGRVTLDGVHFRYRPEAVPVLCGVQLDIRPGEVIGIVGRSGSGKSTLTKLVQRLYVPEQGRI
LVDGIDISLIDAAQLRRQVGVVLQENLLFNRSVRENIAIADPAAPIEAVVHAARLAGAHDFVSELPEGYDTLVGEQGGSL
SGGQRQRIAIARALFTNPRILILDEATSALDYESEAIIQRNMAHICEGRTVLIIAHRLSAVRQAHRIIVMDKGRIVEAGP
HDALIQRPQGLYAHLWRMQDGGGGTVPMTRTGPRTEEVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 2e-168 54
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-168 54
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-168 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC29_11150 YP_007636648.1 hemolysin secretion protein B VFG1269 Protein 1e-177 57
XAC29_11150 YP_007636648.1 hemolysin secretion protein B VFG1557 Protein 1e-168 54
XAC29_11150 YP_007636648.1 hemolysin secretion protein B VFG1501 Protein 1e-168 54
XAC29_11150 YP_007636648.1 hemolysin secretion protein B VFG0907 Protein 7e-169 54
XAC29_11150 YP_007636648.1 hemolysin secretion protein B VFG0841 Protein 2e-161 54