|
Name : secD (XAC29_12765) Accession : YP_007636956.1 Strain : Xanthomonas axonopodis Xac29-1 Genome accession: NC_020800 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2954943 - 2956787 bp Length : 1845 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTCGAATTTCCTCGCTGGAAGTACTTCCTGATCCTGCTGGTACTGGCCGTCAGTGCGCTGTATGCGCTGCCCAACGT GTACCAGAAGGACCCGTCCGTGCAGATCACCGCCAGCCGCGGTGCGCAGCTCGACGACGCACTGCGCAGCCGCATCGACG GTGAGCTCAAGAGCGCCGGCATCACCCCGAAGGCGATCACGAAAGAAGGCGACAGCCTGATGGTGCGGTTGCCTTCGCTG CAGGCGCAGACACGCGCCAACGACGTGTTGCGTCAGCAGCTGGGCGAGAACTACACCGTGGCGCTGAACCTGGCCTCCAC CGTGCCGGACTGGCTGGCCAAGCTGGGCGGCCGACCGATGGTGCTGGGTCTGGACCTGGTGGGCGGTGTGCACTTCGCCA TGCAGGTCGATCAGAAGGCCGCGCTGGAAAAGCGCCTGGACGGGTTTGCCGAAGACATCCGCACCACCTTGCGCGATGCG CGTATCCCGTACCGCTCGGTGGAGCGTCGCGCCGACAACAGTATCCAGGTCAACCTGGGCGAGGGCGCCAGTGCCGACGC CGCGCGCGTGGCGCTGGCCAAGGCGCAGCCGACCCTGACCTACGACGTCAGCGGCCAGAACATCGCCGTGAAGGTGCCGG AGGCCGAACTCAAGCAGATCGCCAGCGGTGCGATCGAGCAGAACCTCACCACCTTGCGCAACCGCGTCAACGCACTGGGC GTGTCCGAGCCGACCATCCAGCGCCAGGGCGAGGACCGCATCGTGGTCGAACTTCCCGGTCTGCAGGACACCGCCGAAGC CAAGCGCCTGATCGGTGCCACCGCCTCGCTGGAATTCCGCGCCGTGGTCGACGGCAACGCCGACGATGCCGTGCGTAGCG GCAACATTCCGCCGGAGGCCAAGGTCTATCGCCTGCGCGACAGCAACGCTCCGGTGTTGTTGAACAAACGCGCGCTGGTG ACTGGCGACCAGATGGTCGATGCCACGGTGGGTAATGACGAAAACGGAATGCCGGCAGTGAATGTGACGCTCAATAATGC TGCAGGCCAGCGTATGTTTGACTATACGAGTGCGAACGTCGGCAAGCTGATGTCCGTGGTCTTCATTGAGCGAGTTCCAA CTGTGACCGTAGTTGACGGCAAGGAAATTCGAAGTGTACGAGTTAAGGAAGAAGCACTGCCTTCGACGCGTATCGCGGGT GTATTTGGCAAGAATTTCCGTACCACCGGCCTGGAAAAGAAAGAAGCCGAAAATCTGGCCAAGCTGCTGAAATCCGGTTC GTTGGCCGCGCCGATGGACTTCGTCGAGGAATACGTGATCGGTCCGAGCCTGGGTGCGGAGAACGTGGAGCGTGGCGTCA CGGCGGTGGTCTACTCGTTCCTGTTCACCCTGGTGTTTTTCACCATCTACTACCGCGTGTTCGGCGCGATCACCTCGGTG GCGCTGCTGTTCAACCTGCTGATCGTGGTGGCGGTGATGTCGCTGTTCGGCGCCACCATGACGCTGCCGGGTTTCGCTGG CCTTGCGCTGTCGGTGGGTCTGTCGGTGGACGCCAACGTGCTGATCAACGAGCGTATCCGTGAAGAGTTGCGGCTCGGCG TGCCGGCCAAATCGGCGATCGCGGCCGGTTACGAAAAGGCCGGCGGCACCATCCTCGATGCGAACCTGACCGGCCTGATC GTGGCGGTGGCCTTGTACGCGTTCGGTACCGGCCCGCTGAAGGGTTTCGCGCTGACCATGATGATCGGTATTTTCGCCTC GATGTTCACCGCGATCACGGTCTCGCGTGCGCTGGCGGTGCTGATCTACGGCAGCCGCAAGAAGCTGAAGTCTGTCGCTA TTTAA Protein sequence : MLEFPRWKYFLILLVLAVSALYALPNVYQKDPSVQITASRGAQLDDALRSRIDGELKSAGITPKAITKEGDSLMVRLPSL QAQTRANDVLRQQLGENYTVALNLASTVPDWLAKLGGRPMVLGLDLVGGVHFAMQVDQKAALEKRLDGFAEDIRTTLRDA RIPYRSVERRADNSIQVNLGEGASADAARVALAKAQPTLTYDVSGQNIAVKVPEAELKQIASGAIEQNLTTLRNRVNALG VSEPTIQRQGEDRIVVELPGLQDTAEAKRLIGATASLEFRAVVDGNADDAVRSGNIPPEAKVYRLRDSNAPVLLNKRALV TGDQMVDATVGNDENGMPAVNVTLNNAAGQRMFDYTSANVGKLMSVVFIERVPTVTVVDGKEIRSVRVKEEALPSTRIAG VFGKNFRTTGLEKKEAENLAKLLKSGSLAAPMDFVEEYVIGPSLGAENVERGVTAVVYSFLFTLVFFTIYYRVFGAITSV ALLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRLGVPAKSAIAAGYEKAGGTILDANLTGLI VAVALYAFGTGPLKGFALTMMIGIFASMFTAITVSRALAVLIYGSRKKLKSVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-105 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-106 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-106 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-106 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-106 | 45 |
