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Name : PCNPT3_05195 (PCNPT3_05195) Accession : YP_007639819.1 Strain : Psychromonas sp. CNPT3 Genome accession: NC_020802 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1218626 - 1220488 bp Length : 1863 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAATAAATTCCCTATGTGGAAATATATACTTCTCTGTTTTGTTATCGTCGTCAGTTTTCTCTATGCGGCGCCTAA CCTTTATGGTGAAGATCCTGCGGTTCAAGTTTCTGCAACCCGCGGTGCAAAAGTTGAAAATCAGACCTTTGAAAGAGTGA ATTCGTTATTACAAGAGAACAATATTACAGCCAAAAGCAGTAAACTTGAAAATGGACAAATTTTGATCCGTCTTTCTTCA AGTACCGATCAGCTAATGGCACGTGATATCATTAAAAATGAACTTAAACATGGTTTCATTACGGCTTTAAATTTAGCCCC TGCAACCCCTGCTTGGTTATCTGCTATTGGCGCTACTCCCCTTAAATTGGGCTTAGATTTACGTGGTGGCGTACACTTCT TAATGGAAGTAGATATGGACGAAGCGGTTAATAAATCACAAGTACAAATGGTACAAGATTTACGATCTGAGCTTCGTGAG CAAAAAATTCGTTTTCGTGGGATCCGTGAAGCAAAAAATACAAGTGCCGTTATCATACGCTTTGTTAATGAAGAGATGCT TGATCAAGCAATACAACATTTAAAGCCTATTAATCCAGGTTACGCGTTTACCGATGAACAAGTAAAAAATGAATTTGTAT TGAAAATCGAGATGACAGATGAAAAGTTACGCGCTATAAAAGAAGATGCGTTACAACAAAATCTAGGTATCTTACGTAAT CGTGTTAATGAACTGGGTGTTGCCGAGCCATTAGTGCAACGTCAAGGTAGTGACCGCATTGTGGTTGAATTACCGGGTAT TCAAGATACTGCGCGTGCCAAAGAGATTTTAGGGGCAACAGCCACACTTGAATTCCACGCGGTTGATTCAACTACGGATA TAAATGATGCACTTTCTGGACGTTTACCTGCATCATCTATTATTCACAAAACACGCTCAGGACGACCGGTTGTTATCAAG AAAAAGATCATCTTAACCGGTAATCATATCGTCGATGCACAATCAAGTAATGATGAATATGGGCGTCCTCAGGTTAGTAT TTCTTTAGACTCCCAAGGTGGCAGTAAGATGTCGCGCTTTACTAAGCATAATATTGGTAAACCGATGGCAACCTTATTCA TCGAATACTTGCCAACGGGTAAGAAAAAAGCCAATGGTAAAGTGATTATTGAGAAACGAGAAGAGATTGCGAATGTGGCA ACTATCCAAGCTCAACTTGGACGTAGCTTCCGTATCACGGGACTTGATAATGCAGCCGAAGCACATAATTTAGCTTTATT ATTACGTGCGGGTGCGTTGATTGCGCCGATTCAAATCGTTGAAGAGCGTACGATTGGGCCGAGCTTAGGCGAGCAAAATA TTGGTAATGGCATTAAAGCGATGGCGTATGGCTTATTTGCGGTCTGCCTCTTTATGTTGATTTATTATCGTAAATTCGGC GCTGTAGCCAACTGTGTGTTAATTTTTAATATCGTGATGATCATAGGCTTAATGTCGATGCTACCCGGGGCGACGTTAAC CTTGCCTGGTATTGCTGGTATTGTCTTGACGGTAGGGATGGCGGTGGATGCCAATGTGTTGATTTTCGAACGTATTCGTG AAGAATTACTCGAGGGAAAATCAGTGCAAAGAGCAATCCATGAAGGGTATGCTAATGCATTTTCAACCATTGCTGATGCC AACATTACAACCTTTATTACCGCTGTGATCTTATTTGCTGTCGGTACAGGTTCAATCAAAGGTTTTGCTGTGACACTTAT GATCGGGATCGCGACATCGATGTTTACATCTATTTTCGGTACTCGTGCGATTGTTAATGCCCTTTGGGGTGGTCGTAATG ATATTAAAAAGCTATCAATATAA Protein sequence : MLNKFPMWKYILLCFVIVVSFLYAAPNLYGEDPAVQVSATRGAKVENQTFERVNSLLQENNITAKSSKLENGQILIRLSS STDQLMARDIIKNELKHGFITALNLAPATPAWLSAIGATPLKLGLDLRGGVHFLMEVDMDEAVNKSQVQMVQDLRSELRE QKIRFRGIREAKNTSAVIIRFVNEEMLDQAIQHLKPINPGYAFTDEQVKNEFVLKIEMTDEKLRAIKEDALQQNLGILRN RVNELGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFHAVDSTTDINDALSGRLPASSIIHKTRSGRPVVIK KKIILTGNHIVDAQSSNDEYGRPQVSISLDSQGGSKMSRFTKHNIGKPMATLFIEYLPTGKKKANGKVIIEKREEIANVA TIQAQLGRSFRITGLDNAAEAHNLALLLRAGALIAPIQIVEERTIGPSLGEQNIGNGIKAMAYGLFAVCLFMLIYYRKFG AVANCVLIFNIVMIIGLMSMLPGATLTLPGIAGIVLTVGMAVDANVLIFERIREELLEGKSVQRAIHEGYANAFSTIADA NITTFITAVILFAVGTGSIKGFAVTLMIGIATSMFTSIFGTRAIVNALWGGRNDIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 50 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 50 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-122 | 50 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-122 | 50 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-121 | 49 |
