Gene Information

Name : PCNPT3_08465 (PCNPT3_08465)
Accession : YP_007640469.1
Strain : Psychromonas sp. CNPT3
Genome accession: NC_020802
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2002841 - 2003350 bp
Length : 510 bp
Strand : -
Note : COG3516 Uncharacterized protein conserved in bacteria

DNA sequence : 
ATGTCTAAAGAAGGAAGTATTGCTCCAAAGGAACGTATTAACATCAAATATGTTCCAGCTACGGGTGATAACCAATCAGA
AGTTGAATTACCATTAAAAATAATGGTTGTAGGTGATTTTAAAGGTCATGGCGAAGAAATGACGATTGAAGATCGTAAGG
CCGTGTCTGTTAATAAAAACAATTTTACATCGGTCATGCATGAAAATAACTTAACCATCAAGACGACTGTCGTAAATAAA
TTATCTGAAGAAAATGAAGGTGATTTGACTGTTGAATTATCTTTTAAATCTTTAGCCGATTTTTCTCCTGATTCAATTGC
ATTCCAAGTTCCAGAGATAAATAAGTTAATTGAATTACGTGAAGCCTTAGTTGCTCTGAAGGGTCCATTAGGTAATATTC
CTGCTTTTCGTTCTCGTCTTCAAGAGATAATTTCTTCGGATGAGTCACGCGAAAAGTTACTTGCAGAATTTAAACTTGTT
AAAGAAGAGCCTAAGCAAGCCCAAAAATAA

Protein sequence : 
MSKEGSIAPKERINIKYVPATGDNQSEVELPLKIMVVGDFKGHGEEMTIEDRKAVSVNKNNFTSVMHENNLTIKTTVVNK
LSEENEGDLTVELSFKSLADFSPDSIAFQVPEINKLIELREALVALKGPLGNIPAFRSRLQEIISSDESREKLLAEFKLV
KEEPKQAQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 4e-37 53
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-34 43
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 1e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCNPT3_08465 YP_007640469.1 hypothetical protein VFG2092 Protein 9e-57 69
PCNPT3_08465 YP_007640469.1 hypothetical protein VFG2474 Protein 1e-37 50