|
Name : ccmF (XCAW_01993) Accession : YP_007649982.1 Strain : Xanthomonas citri Aw12879 Genome accession: NC_020815 Putative virulence/resistance : Unknown Product : Cytochrome c biogenesis factor Function : - COG functional category : - COG ID : - EC number : - Position : 2201023 - 2203053 bp Length : 2031 bp Strand : + Note : - DNA sequence : GTGGGCAAGCAGGTGCAACTGCTGCCGGAATTCGGACTCGGCAGTGCACTTGCCGTTGTGGCACCGGCCCATGCTCGACA ACGCGCCGACCCGATGCTTCCTGAACTCGGGACGTTGCTGCTGGTGCTGGCCCTGCTGGTGGCGCTGGTGCAGGCCGTGG TGCCGCTGGCCGGCGCACAGCGCGGACGCAGCAGCTGGATGGCCGTGGCGCGACCGGCGGCGCTGGTGCAGCTGGCACTG ATCGCATCGGCCTTCGCCGTGTTGACGCACGCCTTCTTGGTGCAGGATTTTTCGGTGCGCTACGTCGCCGAGAATTCCAA CAGCCTGCTGCCGGTGATGTACCGCTATTCGGCAGTGTGGGGTGCGCACGAAGGCTCGCTGCTGCTGTGGACGCTGGTGC TGGGGTTGTGGACCGGCGCGGTGGCGATCTGGTCGCGGCAGCTGCCGGCGCATGTGATCGCGCGCGTGCTCGGCGTCATG GCGCTGGTCAGCATCGGGTTTCTGGCGTTCTTGCTGTTCACCTCCAACCCGTTTGCGCGGTTGTTTCCGGTGCCGCTGGA GGGTGGCGACCTCAATCCGCTGCTGCAGGATCCGGGGCTGATCGTCCATCCGCCGATGCTGTATTGCGGCTACGTCGGCT TTGCGGTGCCGTTCGCATTCGCCATCGCCGCACTGCTGGAAGGCCGCATGGACGCGTGCTGGCTGCGCTGGACGCGGCCG TGGACCAATGTCGCCTGGTCGATGCTCACCGTCGGCATCGCGCTCGGTAGCTGGTGGGCGTATTACGAGCTGGGCTGGGG TGGCTGGTGGTTCTGGGACCCGGTGGAGAACGCCAGTTTCATGCCGTGGCTGGTGGGCACCGCACTGTTGCATTCGCAGG CGGTGACCGAAAAGCGCGGCAGCTTCGCCAGCTGGACCTTGTTGCTGGCGATCGCCGCCTTTGCGCTGTCGCTGCTGGGC ACGTTTCTGGTGCGCTCGGGCGTGCTGACCAGCGTGCATTCGTTCGCCGCCGACCCGTCGCGCGGACTGTTCATTCTGGT ATTCCTGCTGGCCGTGGTCGGTGGTTCGTTGCTGCTGTATGCGCTGCGCGCGCCGCTTCTGTCGGTGGCGGACGATCCGC GTCGCGCATTCGCCGGCAGTTCGCGCGAAACCTTGTTGCTGTTGAACAACCTGCTGCTCACCTGCGCCTGCGCAATGGTG TTGCTGGGCACCTTGTATCCGCTGCTCGCCGATGCCTTGGGGCTGGGCAAGCTGTCGGTTGGCCCGCCCTACTTCGGCAC CTTGTTCGTGGTGTTGATGGCGCCGCTGGTGGCACTGCTGCCCTTCGGCCCGCTCACCCGCTGGCAGCGCGAACAGGCCT CGCGGCCGGTGGCGCTGCTGGCGCCGTGGGCAGCCCTGGCGTTGGCTGCCGGCGTGCTGGCCTGGTTCGCCGCGCCGCAG GGGCAGTTGAAAGCCGCCTTCGGTGTCGCCGGTGCAGCCTGGGTGTTGCTGGGCACCGCGCGGTTCCTGTGGACGCGGCG GGCGGCCAAGGGGCGCAAATTCACCGCCGAGATGCTGGGCATGGTGCTGGCGCACCTGGGCGTTGCGGTGTTCCTGTCCG GTGCCATGCTGGTGGAGGGATTGAGCCTGCAGCGCGAAGTGGCGCTGGCGCCCGGGCAACAGGTGCAGATCGGCCGCTAT GCACTGCATTTCGACGGGCTGGAAGAGCTGCGCGGGCCCAATTACGTGTCCGACCGTGCCAACCTGCAGGTGTTCAAGGA CGATGCGCCGGCGGGCATGCTGCATGCGGAAAAGCGCCGCTACGCCAGTGGCGGCCAGACGTTGACCGAGGCGGCGATCC GCCCTGGCCCGTTTGGCGACCTGTATGTCGCCCTTGGCGAACCGCTGGGCAACCAGGCCTGGGCGGTACGTGTCCACCTC AAACCGTTCGTCCGCTGGATCTGGCTGGGAGCGCTGCTGATGGCGCTCGGCGGCCTGGTGACCGCGGCCGACCGGCGTTT TCGTCGTTCTCCGGAGATCCAAGATGGTTGA Protein sequence : MGKQVQLLPEFGLGSALAVVAPAHARQRADPMLPELGTLLLVLALLVALVQAVVPLAGAQRGRSSWMAVARPAALVQLAL IASAFAVLTHAFLVQDFSVRYVAENSNSLLPVMYRYSAVWGAHEGSLLLWTLVLGLWTGAVAIWSRQLPAHVIARVLGVM ALVSIGFLAFLLFTSNPFARLFPVPLEGGDLNPLLQDPGLIVHPPMLYCGYVGFAVPFAFAIAALLEGRMDACWLRWTRP WTNVAWSMLTVGIALGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALLHSQAVTEKRGSFASWTLLLAIAAFALSLLG TFLVRSGVLTSVHSFAADPSRGLFILVFLLAVVGGSLLLYALRAPLLSVADDPRRAFAGSSRETLLLLNNLLLTCACAMV LLGTLYPLLADALGLGKLSVGPPYFGTLFVVLMAPLVALLPFGPLTRWQREQASRPVALLAPWAALALAAGVLAWFAAPQ GQLKAAFGVAGAAWVLLGTARFLWTRRAAKGRKFTAEMLGMVLAHLGVAVFLSGAMLVEGLSLQREVALAPGQQVQIGRY ALHFDGLEELRGPNYVSDRANLQVFKDDAPAGMLHAEKRRYASGGQTLTEAAIRPGPFGDLYVALGEPLGNQAWAVRVHL KPFVRWIWLGALLMALGGLVTAADRRFRRSPEIQDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 8e-117 | 56 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-103 | 55 |
