Gene Information

Name : sunT (XCAW_02442)
Accession : YP_007650424.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : ABC-type bacteriocin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2725833 - 2728115 bp
Length : 2283 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGAAGGGAAAATCGTTCCTCAGGCCCAGGGCGGGCCGGGGCTGCAGGCACTGCAATCGCTTTGCCTGATCGCCAG
GCTGCACCAGGTGGCGGCGGACCCGGCGGCGCTGGCGCACCAGCTGGGCCTGTCGCCGAGCGAGCCGGTGGACGTGCCGG
ATCTGTTGCGGGCCGCGAAGAGCCTGGGACTGAAGGCGCGCAAAGTGTCGTGCGGCGTGGAGCGGCTGGCACTGACACCC
TTGCCCGCGCTGGCCTTGCTGCGAGAGTCCATGCGAGAGCCCGACCGCGAGCCAGGGGTTGCGGGCGAGGGCAACGACGC
CCCTCGCCATGGCGTTCGCACCGCCGTGCTCGCGCAATGCGATGGCCAGCGTGTGCTGCTGCAGGAGCCCGGGGAGAGCG
CGTCGGCCGGACGTCCGGTGATCGAGCCCGTCGAAGAGTTCGCCAAGCGCTGGACGGGTGATCTCATTCTCGTGAGCAGC
CGCGCGAGCCTGGCGGGCGAACTGGCCCGTTTCGACTTCTCGTGGTTCATCCCGAGCCTCATCAAGCATCGGCGACTGCT
GGGGGAGGTCCTGCTCATCTCCTTCATGCTGCAGCTCTTCGCCCTGGTGAGCCCGCTCTTCTTCCAGGTCGTGATGGACA
AGGTGCTGGTGCACCGAGGACTCACCACGCTGGACGTGCTGGTCGGCGGGCTCGTGGTGGTGGTCGTCTTCGAGAGCCTG
CTGAACGGCCTGCGCGGCTACGTGTTCAGCCACACCACCAGCCGCATCGATGTGGAACTCGGCGCGAAGCTGTTTCGGCA
TCTCGTGCAGCTGCCGCTTGCCTACTTCCAGTCGCGCCGCGTGGGCGACTCGGTGGCGCGCATGCGCGAGCTGGAGAACA
TCCGGGGTTTTCTCACCGGTAACGCGCTCACCGTGGTGCTGGATGTCCTGTTCTCGGTGGTCTTCATTGCGGTGATGGTG
ATGTACAGCGTTCCGCTCACGCTCATCGTGCTCGCGAGCCTTCCGCTGTATTTCGGGCTGAGCCTGGCCGTGGTGCCGGT
GCTGCGGCGGCGCCTGGACCAGAAGTTCGCGCTCGGCGCCGAGAACCAGGCCATGCTCGTGGAGACCGTCACCGGCATCC
AGACCGTCAAGGCGAGCGCCCTGGAGCCCTCGTTCGCGCGGCGCTGGGACAACCAGCTCGCGGCCTACGTCAGCGCCAGC
TTCAAAACCCAGAACCTGGCCGCTTGGGCGCACGAGGGCGTGAACCTGATCGGCAAACTGGTGAACGCGGCCACCCTGTG
GTGGGGCGCGCACCTGGTCATGGACGGCCAGCTCAGCGTGGGCCAGTTCGTCGCCTTCAACATGTTCGCGCAGCGCGTGG
CGCAGCCCATCATGCGCATGGCGCAGCTATGGACGGACTTCCAGCAGACGGGCATCTCCATGGCCCGGCTGGGCGACATC
CTCAATACCCGCACCGAGGTGCCCGCCACCAGCGCCGCGCAGTTGCCAGCCCTGCGCGGGCGCGTCACGCTCGATGGCGT
GCACTTCCGCTACCGGCCCGAGGCCGTGCCGGTGCTCTGCGGCGTGCAACTGGACATCCGCCCCGGCGAGGTCATCGGCA
TCGTGGGCCGCTCGGGCTCGGGCAAGAGCACCCTGACCAAGCTCGTGCAGCGCCTCTACGTGCCCGAGCAGGGCCGCATC
CTGGTGGACGGCATCGACATCAGCCTGATCGATGCCGCGCAGCTGCGGCGGCAGGTGGGCGTCGTGCTGCAGGAGAACCT
CCTCTTCAACCGCAGTGTGCGCGAGAACATCGCCATCGCCGATCCTGCAGCACCCATCGAGGCCGTGGTGCATGCGGCGC
GGCTGGCGGGCGCGCACGATTTCGTGAGCGAGCTGCCCGAGGGCTACGACACACTCGTGGGCGAGCAGGGCGGCAGCCTC
TCGGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGGGCGCTGTTCACCAACCCGCGCATCCTCATCCTCGACGAGGCCAC
CAGCGCGCTCGACTACGAGAGCGAGGCCATCATCCAGCGCAACATGGCGCACATCTGCGAGGGCCGCACCGTGCTCATCA
TCGCCCACCGCCTCTCGGCCGTGCGCCAGGCCCACCGCATCATCGTGATGGACAAGGGGCGCATCGTGGAGGCCGGCCCG
CACGACGCGCTCATCCAGCGCCCGCAGGGGCTCTACGCCCACCTGTGGCGCATGCAGGACGGGGGCGGCGGCACGGTTCC
AATGACTCGCACTGGTCCGCGCACCGAGGAGGTGGTGGCATGA

Protein sequence :
MSEGKIVPQAQGGPGLQALQSLCLIARLHQVAADPAALAHQLGLSPSEPVDVPDLLRAAKSLGLKARKVSCGVERLALTP
LPALALLRESMREPDREPGVAGEGNDAPRHGVRTAVLAQCDGQRVLLQEPGESASAGRPVIEPVEEFAKRWTGDLILVSS
RASLAGELARFDFSWFIPSLIKHRRLLGEVLLISFMLQLFALVSPLFFQVVMDKVLVHRGLTTLDVLVGGLVVVVVFESL
LNGLRGYVFSHTTSRIDVELGAKLFRHLVQLPLAYFQSRRVGDSVARMRELENIRGFLTGNALTVVLDVLFSVVFIAVMV
MYSVPLTLIVLASLPLYFGLSLAVVPVLRRRLDQKFALGAENQAMLVETVTGIQTVKASALEPSFARRWDNQLAAYVSAS
FKTQNLAAWAHEGVNLIGKLVNAATLWWGAHLVMDGQLSVGQFVAFNMFAQRVAQPIMRMAQLWTDFQQTGISMARLGDI
LNTRTEVPATSAAQLPALRGRVTLDGVHFRYRPEAVPVLCGVQLDIRPGEVIGIVGRSGSGKSTLTKLVQRLYVPEQGRI
LVDGIDISLIDAAQLRRQVGVVLQENLLFNRSVRENIAIADPAAPIEAVVHAARLAGAHDFVSELPEGYDTLVGEQGGSL
SGGQRQRIAIARALFTNPRILILDEATSALDYESEAIIQRNMAHICEGRTVLIIAHRLSAVRQAHRIIVMDKGRIVEAGP
HDALIQRPQGLYAHLWRMQDGGGGTVPMTRTGPRTEEVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-168 54
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-168 54
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-168 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sunT YP_007650424.1 ABC-type bacteriocin VFG1269 Protein 5e-178 57
sunT YP_007650424.1 ABC-type bacteriocin VFG0841 Protein 1e-161 54
sunT YP_007650424.1 ABC-type bacteriocin VFG1557 Protein 1e-168 54
sunT YP_007650424.1 ABC-type bacteriocin VFG1501 Protein 1e-168 54
sunT YP_007650424.1 ABC-type bacteriocin VFG0907 Protein 6e-169 54