|
Name : H681_09165 (H681_09165) Accession : YP_007657247.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1999438 - 2001411 bp Length : 1974 bp Strand : + Note : COG1138 Cytochrome c biogenesis factor DNA sequence : ATGGTTCCCGAACTCGGCCACCTTTCGCTGATCCTCGCGCTGTGCATGGCGCTGGTGATGTCCTTCTTCCCGCTGATCGG CGCCTGGCGCGGCGATCGCCAGTGGATGAGCCTGGCGCGCCCGGCGGCCTGGGGGCAGTTCGCCTTCCTGCTGTTCTCCT TCGGCTGCCTGAGCTGGGCCTTCCTCCACGATGATTTCTCGGTGGCCTACGTCGCCAGCAACTCCAACAGCGCGCTGCCC TGGTTCTACAAGTTCAGCGCCGTGTGGGGCGCCCACGAAGGCTCGCTGCTGCTCTGGGCGCTGATTCTCGGCGGCTGGAC CTTCGCCGTGTCGGTGTTCTCCCGCCAGTTGCCGGAAGTGATGCTGGCCCGCGTACTCGCCGTGATGGGCATGATCAGCA CCGGCTTCCTGCTGTTCCTGATCATCACCTCCAACCCCTTCAGCCGTTTGCTGCCGCAGGTGCCGGCCGACGGCAACGAC CTCAACCCGTTGCTGCAGGACCCCGGCCTGATCTTCCACCCGCCGATGCTCTACATGGGCTACGTGGGCTTCTCGGTGGC CTTCGCCTTCGCCATCGCCGCGCTGCTCGGCGGCCGCCTCGACGCCGCCTGGGCGCGCTGGTCGCGTCCGTGGACCCTGG TGGCCTGGACCTTCCTCGGCATCGGCATCGTGCTCGGCTCCTGGTGGGCCTACTACGAGTTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTGGAAAACGCCTCCTTCATGCCCTGGCTGGTGGGCACCGCGCTGATCCACTCGCTGGCGGTGACCGA GAAGCGCGGCGTGTTCAAGAGCTGGACCGTGCTGCTGGCCATCGCGGCCTTCTCCCTGAGCCTGCTGGGCACCTTCCTGG TCCGCTCCGGCGTACTGACCTCGGTGCACGCCTTCGCCTCCGACCCCGAGCGCGGCGTGTTCGTCCTCGCCTTCCTGCTG ATGGTGGTCGGTGGCTCACTGACGCTGTTCGCCCTGCGCGCGCCGGTGGTCAAGAGTCAGGTCGGCTTCGCCCTGTGGTC CCGCGAGACCCTGCTACTGCTGAACAACCTGATCCTGGTGGTCACCGCCTCGATGATCCTGCTGGGCACCCTCTACCCGC TGGTGCTCGACGCCATCAGCGGCGCCAAGCTGTCGGTCGGTCCGCCGTACTTCAACGCGCTGTTCGTGCCGCTGATCGCC ATCCTCATGCTGGCCCTGGCGGTCGGCGTGCTGGTGCGCTGGAAGGACACCCCGACCCGCTGGCTGCGCGGCATGCTCAC CCCGGTGCTGATCGGTACCCTGGTGCTGGGCGTGGCCGGCAGCTTCCTCTATGGCGAGTTGCACTGGGAAGTGCTGACGG TGTTCCTGCTGGCCGCCTGGGTGGTGCTGGCCGGCGTGCGTGACTTCTTCGACAAGGTCCGCCACAAGGGGGTAATCGCC GGTGCCGCGGGCCTCAATCGCAGCTACTGGGGCATGCAGCTGGCGCACTTCGGTATCGCCATCTGCGCCATCGGCGTGGT CCTCACCAGCCAGTTCAGCGCCCAGCGCGACCTGCGCATGGAGCCGGGCGAGTCGGTGGAGCTGGCCGGTTACCAGTTCC GCTTCGAGGGCACCCATCACTTCGAAGGCCCGAACTTCACCTCCGACAAGGGCACCATCCGCGTGACCCGCGACGGTTCC GAAGTGGCGGTGCTGCACCCGGAGAAGCGTCTGTACAGTGTGCAGAACTCGATGATGACCGAGGCCGGCATCCACGGCAG CCTGACCCGCGACCTCTACGTCGCCCTGGGTGAGCCGCTGGAGAACGGCGCCTGGGCAGTGCGGGTGCACATCAAGCCGT TCGTGCGCTTCATCTGGCTGGGCGGCCTGATGATGGCCCTGGGTGGCGTGCTGGCGGCGCTGGACCGTCGCTACCGCCTG AAAGTGAAAACGCGTGTACGCGAGGCCCTGGGCCTCGCCGGACAGGGAGCCTGA Protein sequence : MVPELGHLSLILALCMALVMSFFPLIGAWRGDRQWMSLARPAAWGQFAFLLFSFGCLSWAFLHDDFSVAYVASNSNSALP WFYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPEVMLARVLAVMGMISTGFLLFLIITSNPFSRLLPQVPADGND LNPLLQDPGLIFHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWTFLGIGIVLGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFVLAFLL MVVGGSLTLFALRAPVVKSQVGFALWSRETLLLLNNLILVVTASMILLGTLYPLVLDAISGAKLSVGPPYFNALFVPLIA ILMLALAVGVLVRWKDTPTRWLRGMLTPVLIGTLVLGVAGSFLYGELHWEVLTVFLLAAWVVLAGVRDFFDKVRHKGVIA GAAGLNRSYWGMQLAHFGIAICAIGVVLTSQFSAQRDLRMEPGESVELAGYQFRFEGTHHFEGPNFTSDKGTIRVTRDGS EVAVLHPEKRLYSVQNSMMTEAGIHGSLTRDLYVALGEPLENGAWAVRVHIKPFVRFIWLGGLMMALGGVLAALDRRYRL KVKTRVREALGLAGQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-131 | 57 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-141 | 57 |
