Gene Information

Name : H681_09330 (H681_09330)
Accession : YP_007657280.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2029507 - 2031459 bp
Length : 1953 bp
Strand : +
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
GTGCACAGCTCGCTGCGCCGCCTGGATACCACTCCACTCCCTGCCATTGCTGCCGATCATGAAGGCCATTACTTCATCAT
CGCTCGCCTCGATGATGGCAAAGCCCTCATCCATGACCCGCAGGCTCAGCGTCCCGAGGTTCTGAGCCTTGAGGCACTGG
AGGCGCGTTGGACCGGTGAACTGATTCTGATCCGCTCCGAGGCCTCCCTGTCTGGCGAGCTGTCACGTTTCGACTTCACC
TGGTTCATTCCGGCCATCGTCAAGTACCGCAAGCTGCTGGGCGAAGTGCTGCTGGTGTCGTTCGTGCTGCAGATCTTCGC
GCTGCTCACGCCGCTGTTCTTTCAGGTGGTGATGGACAAGGTGCTGGTGCACCGTGGCCTGTCGACCCTGGATGTGATCG
CCATCGGCCTGCTCGGCATCATGATCTTCGAGACCCTGCTGTCGGGCTTGCGCAGCTATGTGTTCGCCCATACCGCGAGC
CGCATCGACGTGGAGCTGGGGTCGAAGCTGTTCCGCCATCTGGTGACCCTGCCGCTGGCGTATTTCCAGGCCCGTCGGGT
GGGGGACTCGGTGGCGCGGGTACGTGAACTGGAGAACATCCGCAGCTTTCTCACCGGCAATGCCATCACGCTGATCCTCG
ACGTGCTGTTCTCCGTGGTGTTCATCGCGGTGATGTTCTACTACAGCGGCTGGCTGACCCTGGTGGTGATTCTGTCGCTG
CCGCTGTATTTCCTGGTGTCTCTGCTGATCACCCCGGTCTTGCGCGCGCGCCTCAACGAGAGCTTCTCCCGGGGCGCGGA
AAACCAGGCCTTTCTGGTGGAGACGGTCAACGGCATCGATACCCTCAAGGCCATGGCGGTGGAACCGCAGATCAACCGCA
AGTGGGACAACCAACTGGCCGGTTATGTGGCTGCGAGTTTCAAGACGCAGAACCTTTCCATGCTGGCCAATGAAAGTGTT
GGTTTCATCGGCAAGCTGGTCACCGTGGCCACGCTCTGGCTGGGCGCGCGCCTGGTGATCGAGGGTGACCTGACGGTCGG
CCAGTTGATCGCTTTCAACATGCTGGCCGGGCGGGTCTCACAGCCGATCATGCGCCTGGCCCAGCTGTGGACCAACTTCC
AGCAGACCGGCGTCTCGGTGCAGCGCCTGGGCGACATCCTCAATACCCGCACCGAACTGTCCCAGGCCACCCGTAGCGCG
CTGCCGCCCCTGAAAGGGCAGATCGAGTTCGATCAGGTGCACTTCCGCTACCGCCCGGATGGCTCGGAGATTCTGCGTGG
CATCAGCTTGCACATTCAGGCTGGCGAAGTGATCGGTGTGGTCGGCCGCTCCGGCTCTGGCAAGAGCACCCTCACTCGAC
TGCTGCAGCGTCTTTATACGCCTGAGCGTGGCCGGGTGCTGGTCGACGGTATGGACCTGGCCCTGGCCGACGTCTCCTCC
CTGCGTCGGCAGATCGGCGTAGTGCTGCAGGACAACATGCTGTTCGCCCGCAGCATCCGCGAGAACATCGCGCTGACCGA
TCCGGGCGCACCCATCGAACAGGTGATGCAAGCGGCCAAGATGGCCGGTGCTCATGAATTCATCCTGGAACTGCCAGAAG
GCTACGACACCGTGGTTGGTGAGCACGGTGCTTCGCTCTCCGGCGGCCAACGGCAACGCATCGCCATCGCCCGCGCTCTG
ATTGGCAACCCGCGCATCCTCATTTTCGACGAGGCCACCAGCGCGCTGGACTACGAGTCCGAACGCATCATCCAGCAGAA
CATGCAGGCCATCTGCAAGGGCCGCACGGTGATCATCATCGCTCACCGCCTGAGTGCGGTGCGCGACGCCAACCGCATCC
TGGTGATGGATCGCGGGCAGATCGTCGAGCAGGGCAGCCATGCCGAACTGCTCACCCATCAGGCCGGCCACTATTCCCGT
CTGCATCGCCTGCAGCAAGGCGGTGCCGCATGA

Protein sequence :
MHSSLRRLDTTPLPAIAADHEGHYFIIARLDDGKALIHDPQAQRPEVLSLEALEARWTGELILIRSEASLSGELSRFDFT
WFIPAIVKYRKLLGEVLLVSFVLQIFALLTPLFFQVVMDKVLVHRGLSTLDVIAIGLLGIMIFETLLSGLRSYVFAHTAS
RIDVELGSKLFRHLVTLPLAYFQARRVGDSVARVRELENIRSFLTGNAITLILDVLFSVVFIAVMFYYSGWLTLVVILSL
PLYFLVSLLITPVLRARLNESFSRGAENQAFLVETVNGIDTLKAMAVEPQINRKWDNQLAGYVAASFKTQNLSMLANESV
GFIGKLVTVATLWLGARLVIEGDLTVGQLIAFNMLAGRVSQPIMRLAQLWTNFQQTGVSVQRLGDILNTRTELSQATRSA
LPPLKGQIEFDQVHFRYRPDGSEILRGISLHIQAGEVIGVVGRSGSGKSTLTRLLQRLYTPERGRVLVDGMDLALADVSS
LRRQIGVVLQDNMLFARSIRENIALTDPGAPIEQVMQAAKMAGAHEFILELPEGYDTVVGEHGASLSGGQRQRIAIARAL
IGNPRILIFDEATSALDYESERIIQQNMQAICKGRTVIIIAHRLSAVRDANRILVMDRGQIVEQGSHAELLTHQAGHYSR
LHRLQQGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 60
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 60
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_09330 YP_007657280.1 hypothetical protein VFG1269 Protein 0.0 64
H681_09330 YP_007657280.1 hypothetical protein VFG1557 Protein 0.0 60
H681_09330 YP_007657280.1 hypothetical protein VFG1501 Protein 0.0 60
H681_09330 YP_007657280.1 hypothetical protein VFG0907 Protein 0.0 60
H681_09330 YP_007657280.1 hypothetical protein VFG0841 Protein 0.0 59