Gene Information

Name : H681_11820 (H681_11820)
Accession : YP_007657774.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2614829 - 2617063 bp
Length : 2235 bp
Strand : -
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGTCCTCCCGTCCGTTGTCCTTCGTTGCGCCCTTCCTGCTGTTGTCCAGTTGCCTGCTGTCCTCCGCCGTACACGCCGC
CAACGCCGATTCCGACGTGGTCGAGTTCGACAGCGAGACCGTCGTCGCCACCGCCGCGGAAGAAGCCAAGCAGATGCCGG
GCGTATCGATCATCACCGCCGAGGACATCCAGAAGCGCCCGCCGTCCAACGACCTGTCGCAGATCATCCGCACCATGCCC
GGCGTCAACCTGACCGGTAACTCCAGCAGCGGCCAGCGCGGCAACAACCGGCAGATCGACATTCGCGGCATGGGCCCGGA
GAACACCCTGATCCTGGTGGACGGCAAGCCGGTCGCCAGCCGCAATGCGGTGCGCTACGGCTGGCGCGGCGAGCGCGACA
CCCGCGGCGACAGCAACTGGGTGCCGGCCGACCAGGTGGAACGCATCGAAGTCCTGCGCGGCCCGGCGGCGGCGCGCTAC
GGCAACGGCGCGGCGGGCGGCGTGGTGAACATCATCACCAAGCAGGCCGGCAGCCAGACCCACGGCGACGTGACCCTCTA
CAGCAACTTCCCGCAGCACGGCGACGAAGGCGCCACCCAGCGCATGACCTTCGGCCTCAACGGCCCGCTGACCGACACCC
TGAGCTATCGCGTATACGGCAACGTGGCCAAGACCGATTCGGACGACTGGGACATCAACGCCGGCCATGAGTCCGAGCGC
ACCGGCAACCAGGCCGGCACCCTGCCCGCCGGCCGCGAAGGCGTGCGCAACAAGGACATCAACGGTCTGCTCAGCTGGCG
CTTGACGCCCGAACAGACCCTCGACGTCGAGGCCGGCTTCAGCCGCCAGGGCAATATCTATACCGGCGACACCCAGAACA
CCAACAGCAACGCCAACGTGAAATCCATGCTCGGTCACGAGACCAACCGCATGTACCGCGAGAACTACTCGGTCACCCAT
CGCGGCGAGTGGGATTTCGGCAGCTCGATGGCCTACCTGCAATACGAGAAGACCCGCAACAGTCGCATCAACGAAGGCCT
CGCCGGCGGCACCGAAGGCATCTTCAACAACACCGATTTCTACACCGCCACCCTGCGCGACCTCACCGCCCACGGCGAAG
TGAACCTGCCGCTGCACGCCTGGCGCGACCAGACCCTGACCCTGGGCAGCGAATGGGTCCGCCAGGAGCTCGACGACCCC
AGCGCCAATACCCAGTCCACCAGCGAAGGCGGCGCGGTGCCGGGCCTGGACAGCAGCGGACGCAGCACCACCTCGTCGGC
GCGCATCTTCTCGCTGTTCGCCGAGGACAACATCGAGCTGATGCCCGGCACCATGCTCACCCCTGGCCTGCGCTGGGACC
ACCACGACATCGTCGGCGACAACTGGAGCCCGTCGCTGAACCTGTCCCACGCGCTGACCGATACCCTCACCCTGAAGGCC
GGCATCGCCCGTGCCTACAAGGCGCCGAACCTGTACCAGCTCAACCCCGACTACCTGCTCTACAGCCGTGGCCAGGGCTG
CTACGGCCAGACCACCAGCTGCTACCTGCAGGGCAACGAGGACCTCGAGGCCGAGACCAGCGTCAACAAGGAACTGGGCA
TCGAGTACCAGCGTGACGGCTGGGTCGCCGGCCTGACCTACTTCCGCAACGACTACAAGAACAAGATCGACTCAGGCCTC
TCGCCGGTCGGCGAGGCCAGCGGCGGCAGCGGCAACTACGCCAACGCGGCGATCTACCAGTGGGAAAACGTGCCCAAGGC
GCTGGTCGAAGGCCTGGAAGGCACCCTGACCATTCCCCTGGCCGCGCAACTGAAGTGGAGCAACAACTTCACCTACATGC
TCCAGTCGAAGAACAAGGAAACCGGCGACGTGCTCTCGGTGACCCCGGAGTACACCCTCAACTCCATGCTCGACTGGCAG
GCTCGCGACGACCTGTCCTTCCAGGCCACCGTGGCCTGGTACGGCAAGCAGAAGCCGAAGAAGTACGACTACCAGGGCAA
CCGCGTGACCGGCAGCGCCAACGACGAACTCTCGCCCTACGCCATCGCCGGCCTGAGCGGCACCTATGCCTTCACCCGGA
ATCTCAGCCTCACCGCCGGCGTCGACAACCTCTTCGACAAGCGCCTGTTCCGCGCCGGCAACGCCCAGAGCGTGAACAAC
ATCGCCGGCGCCGGCGCGGCGACCTACAACGAGCCGGGGCGCACCCTCTACACCAGCCTGACCGCGTCCTTCTGA

Protein sequence :
MSSRPLSFVAPFLLLSSCLLSSAVHAANADSDVVEFDSETVVATAAEEAKQMPGVSIITAEDIQKRPPSNDLSQIIRTMP
GVNLTGNSSSGQRGNNRQIDIRGMGPENTLILVDGKPVASRNAVRYGWRGERDTRGDSNWVPADQVERIEVLRGPAAARY
GNGAAGGVVNIITKQAGSQTHGDVTLYSNFPQHGDEGATQRMTFGLNGPLTDTLSYRVYGNVAKTDSDDWDINAGHESER
TGNQAGTLPAGREGVRNKDINGLLSWRLTPEQTLDVEAGFSRQGNIYTGDTQNTNSNANVKSMLGHETNRMYRENYSVTH
RGEWDFGSSMAYLQYEKTRNSRINEGLAGGTEGIFNNTDFYTATLRDLTAHGEVNLPLHAWRDQTLTLGSEWVRQELDDP
SANTQSTSEGGAVPGLDSSGRSTTSSARIFSLFAEDNIELMPGTMLTPGLRWDHHDIVGDNWSPSLNLSHALTDTLTLKA
GIARAYKAPNLYQLNPDYLLYSRGQGCYGQTTSCYLQGNEDLEAETSVNKELGIEYQRDGWVAGLTYFRNDYKNKIDSGL
SPVGEASGGSGNYANAAIYQWENVPKALVEGLEGTLTIPLAAQLKWSNNFTYMLQSKNKETGDVLSVTPEYTLNSMLDWQ
ARDDLSFQATVAWYGKQKPKKYDYQGNRVTGSANDELSPYAIAGLSGTYAFTRNLSLTAGVDNLFDKRLFRAGNAQSVNN
IAGAGAATYNEPGRTLYTSLTASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 3e-156 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_11820 YP_007657774.1 outer membrane receptor FepA VFG0923 Protein 0.0 63
H681_11820 YP_007657774.1 outer membrane receptor FepA VFG1650 Protein 2e-156 53
H681_11820 YP_007657774.1 outer membrane receptor FepA VFG0935 Protein 1e-155 53