Gene Information

Name : H681_12630 (H681_12630)
Accession : YP_007657936.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2820382 - 2820888 bp
Length : 507 bp
Strand : +
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence : 
ATGCCTTCAGTCGACGCTCCGCTCCACGCCGCCGTCAGTGAGCTCTATCAGCACCATCACGGTTGGCTGCAAGGCTGGCT
GCGTCGGCGCCTGGGCTGCCATGAACAGGCCGCCGACCTGGCCCAGGACACCTTCACCCGCCTGCTCGGCTCACGCCGGG
TGCTGGAGGCCCGCGAGCCGCGCGCGTACCTCACCACGGTGGCCAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCG
CTGGAACGCGCCTACCTCGAAGCGCTCGCCAATCTGCCCGAAGAGCTGGCGCCCTCGCCGGAGCAGCGTTACCTCGTGCT
GGAAACCCTGCACGAGGTGGATGCCCTCCTCGCCCGCCTGCCCGATCCCGTGCGCCAGGCCTTCCTGCTGGCGCAGATCG
AGGAGCTGAAGTACGAGGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGGTCGGTGAAGCGCTATATGCAGCAGGCCTTC
CGCCACTGCCTGGAGCTGATGGAGTGA

Protein sequence : 
MPSVDAPLHAAVSELYQHHHGWLQGWLRRRLGCHEQAADLAQDTFTRLLGSRRVLEAREPRAYLTTVAKGLMINWFQRQS
LERAYLEALANLPEELAPSPEQRYLVLETLHEVDALLARLPDPVRQAFLLAQIEELKYEAIAERLGVSLGSVKRYMQQAF
RHCLELME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-27 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_12630 YP_007657936.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 2e-27 50