|
Name : H681_17575 (H681_17575) Accession : YP_007658923.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Virulence Product : TonB-dependent receptor Function : - COG functional category : - COG ID : - EC number : - Position : 3963169 - 3965334 bp Length : 2166 bp Strand : - Note : COG4772 Outer membrane receptor for Fe3+-dicitrate DNA sequence : ATGTCGCACGTTCGTTCATGGTCGCGCCTGGCGATCGCCGTTACCCTGGCCACGCCGCTGCTGCCGGTCCAGGCCGAGGA AGAGACCAAGGAGCTGGAAGCCGTCACCGTGGTCGGTGACTGGCTCGGCGAAGCCGACCAGCAGGTGGTGCAGAACCACC CCGGCGCGCGCACCGTGGTGCGTCGCGAGCAGATGATCGAAGAAGGCGCGCAGAACGTTCGCGACGTGCTGCGTGGCATC CCCGGCGTGCAGGTGCAGGACAACAACGGCACCGGCGGCAGCGATATCTCCCTCAACGTCGGCGTGCGCGGCCTGACCTC GCGCCTGTCGCCGCGCTCCACCGTGCTCATCGATGGCGTCCCGGCCGCCGTGGCGCCCTATGGCCAGCCGCAGCTGTCGA TGTTCCCGCTGTCGGTGGGCAACCTCGACAGCGTCGACGTGGTGCGTGGCGCCGGTTCCGTGCGCTATGGCCCGCAGAAC GTCGGCGGGGTGATCAACTTCGTTACCCGGGCGATTCCCAAGGAGTTTTCCGGCGACGTCGGCACCACCATCGAAACCGC CTCCCACGGCGGCTGGAAGAAGCTCTATAACGCCTTCCTCGGCGGCACCGCCGACAACGGCATGGGCGCCGCGCTGCTGT ACTCCGGCGTGAAAGGCGCGGGTTACCGCGACGGCAACGACTCCACCGACATCGACGACGTGATGCTCAAGACCCACTGG GCGCCGACCGACGTCGACGAGTTTTCCGCCAACTTCCACTACTACGACGGCAGCGCCGACATGCCCGGTGGCCTGACCCA GGCGCAGTTCGACGACGATCCGTACCAATCCGTGCGCGACTGGGACAACTTCACCGGCCGCCGCAAGGACGTCTCGCTCA AGTACAAGCGGCAGATCGACGACCTGACCCAGTTCGAGGTGCTGACCTACTACAGCGACAGCTTCCGTGGCAGCACCATC GCCAACCGCGATCTCAAGACCCTGGCGTCCTACCCGCGCGACTACCACACCTTCGGCATCGAGCCGCGGGTGTCGAAGGT CTTCATGGTCGGTCCGACCACCCAGGAAGCCAGCATCGGCTATCGCTACCTGAAGGAGGCCATGCACGAGCGCGCCAGCC TGGTCGGCCTGGTGAACAACGTGCCCACGCCGACGGCCGACGCCGACGGCCATACCTACCAGGACCGTACCGGCGGTACC GAAGCCAACGCCATCTACCTCGACGACAAGATCGACATGGGTAACTGGAGCGTGACCCCGGGCATCCGCTTCGAAAGCAT CTCCACCGACTGGCACGACCGCCCCGTGCTCGACAACAAGGGCAAGCCGGTGCAGGAGAAGAAGCGCAGCAAGGACTACA ACGAGCCGCTGCCGGCGCTGGCGGTGATGTATCACCTGTCGGACGAGTGGAAGCTGTTCGCCAACTACGAGACCTCCTTC GGCAGCCTGCAGTACTTCCAGCTCGGCCAGGGCGGCAGCGGCAACGACACCGCCAACGGCCTGCAGCCGGAAAAGGCCAA GACCTACGAAGTGGGCACCCGCTACGACAACGGCGTGTGGGGTGGCGAAGTGACGCTGTTCTACATCGACTTCGACGACG AGCTGCAGTACATCAGCCGCGACGTGGGCTGGACCAACCTGGGCGCCACCAAGCACCAGGGCATCGAGACGTCGGCACAC TACGACATGGCCGCACTCGACCCGGTACTCGCCGGCCTGACCGCCTACGGCACCTTCACCTACACCCGCGCGACCTACGA AGGCGAGATCCCCGGCTTCAAGGGCCGTGACCTGCCGCTGTACTCGCGCCAGGTGGCGACCGTCGGCCTGCGCTACGAGC ATGACCGCTGGACCTACAACCTGGACGGCTTCGCCCAGTCGAAGCAACGTGCGCCCGGTCCGACCACCAACGCCAACGGC AGCTTCACCGGCGACTACATCACCGAGCCGAGCGCCGATGGCCGGTACGGCGACATCCCCGGCTACATGCTGTGGAACGC CCGCGTCGGTTATGACTTCGGCCCGCAGGCGTCGAACCTGAAAGTCGCCGCCGGGGTGAAGAACCTCTTCGACCAGATGA ACTACACCCGCTCCAGCGACAACAACTCCGGTATCTACCTGGGCGAGCCGCGCACCTTCTTCGTGCAGGGCAGCGTCGGT TTCTAA Protein sequence : MSHVRSWSRLAIAVTLATPLLPVQAEEETKELEAVTVVGDWLGEADQQVVQNHPGARTVVRREQMIEEGAQNVRDVLRGI PGVQVQDNNGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAVAPYGQPQLSMFPLSVGNLDSVDVVRGAGSVRYGPQN VGGVINFVTRAIPKEFSGDVGTTIETASHGGWKKLYNAFLGGTADNGMGAALLYSGVKGAGYRDGNDSTDIDDVMLKTHW APTDVDEFSANFHYYDGSADMPGGLTQAQFDDDPYQSVRDWDNFTGRRKDVSLKYKRQIDDLTQFEVLTYYSDSFRGSTI ANRDLKTLASYPRDYHTFGIEPRVSKVFMVGPTTQEASIGYRYLKEAMHERASLVGLVNNVPTPTADADGHTYQDRTGGT EANAIYLDDKIDMGNWSVTPGIRFESISTDWHDRPVLDNKGKPVQEKKRSKDYNEPLPALAVMYHLSDEWKLFANYETSF GSLQYFQLGQGGSGNDTANGLQPEKAKTYEVGTRYDNGVWGGEVTLFYIDFDDELQYISRDVGWTNLGATKHQGIETSAH YDMAALDPVLAGLTAYGTFTYTRATYEGEIPGFKGRDLPLYSRQVATVGLRYEHDRWTYNLDGFAQSKQRAPGPTTNANG SFTGDYITEPSADGRYGDIPGYMLWNARVGYDFGPQASNLKVAAGVKNLFDQMNYTRSSDNNSGIYLGEPRTFFVQGSVG F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 6e-138 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H681_17575 | YP_007658923.1 | TonB-dependent receptor | VFG1047 | Protein | 4e-138 | 45 |
