|
Name : secD (H681_18970) Accession : YP_007659201.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 4246847 - 4248709 bp Length : 1863 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTCAACAAGTATCCCCTGTGGAAGTATCTGCTGATCCTGGCGGTCCTGGCCGTTGGTTTCATCTACTCCGCACCCAA CCTCTACCCGGATGACCCGGCCGTGCAGATCAGTGGTGCGAGCACCGCGCTGCAGGTGTCGCAGGCCGACCTGGACAAGG CCGGCAAGGCGCTGGCCGATGCGGGCATCGCCGTCAAGGCGGGTAGCCTCGGCAAGAACAGCGGCCTGATTCGTCTGGCC AGGCAGGAAGATCAGCTGCCGGCCAAGGACATTGTCCGCCGCGCGCTGGGTGACGACTACGTAGTCGCCCTGAATCTGGC CCAGACCACTCCGAACTGGCTGCGCAATATCGCTGCTCACCCGATGAAGCTGGGTCTCGACCTGTCCGGTGGTGTGCACT TCCTGCTGGAAGTGGACATGGACAAAGCCGTCGACGCCCGCATGAAGGTTTACGAAAGCGAGATCAAGAGCGCCCTGCGC AAGGATCGCGTGCGCTATCGCAGCCTGCCGGCGCAGGATGGCGGCATCCAGCTGGGCTTCACCGAAGAAGCCGACCTGGA CAAGGCCAAGTCCCTGATTGCCAAGGACTACCGCGATTTCGAAGTCACCCAGAGCGAGCGCACCGGCATGCAGGTGCTGC GCCTGGGGATGACCCCGGCGAAGCTGGCGGAAATCCGCGAGTACTCGATCAAGCAGAACCTCACCACCGTTCGCAACCGT GTGAACGAGCTGGGCGTGTCCGAGCCGCTGGTGCAGCGCCAGGGCGCCAATCGTATCGTGGTCGAGCTGCCGGGCGTGCA GGACACCGCCGAAGCCAAGCGTATCCTCGGCAAGACCGCCAACCTCGAGTTCCGCCTGGCCGCCGAGCCGGACGCGATCA GATCCGCCACCGAAACCTTCGAGTTCCGTGAGCCGCGTCGTCCGCCGGCAACCCTGGAGCGTGGCGTGATCATCACCGGT GACCAGGTCACCGACGCCAGCGCCAGCTTCGACGAGAACGGCCGCCCGCAGGTGAACATCCGTCTGGATGGCCACGGCGG CGAGCTGATGAACCGCGCGACTCGTAACAACGTCGGCCGCAGCATGGCGGTGGTGTTCATCGAGCAGAAGCCGATCACCC GCTACGCCAAGCAGGTCGTCGACGGCGTCGAGCAGGAAGTCGCGGTTCCGGCGTTCAAGGAAGAGAAGAAGATCATCAGC CTGGCGACCATCCAGTCGCCGCTGGGTAACCAGTTCCGCATCACCGGCCTGGACGCTCCGGGTGAATCCTCTGAACTGGC CCTGCTGCTGCGTGCCGGTGGCCTGGCGGCACCGATGTACTTCGCGGAAGAGCGCACCATCGGCCCGAGCCTGGGTGCGG ACAACATCGCCAAGGGCATCGACGCGTCCCTGTGGGGCATGGTCTTCGTGTCCCTGTTCATCATCGTGATCTACCGCTTC TTCGGCGTGATTGCCACCGTCGCCCTGGCGTTCAACATGGTCATGCTGGTGGCGTTGATGTCGATCCTCGGTGCGACCCT GACCCTGCCGGGTATCGCGGGTATCGTACTGACGATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGGATAC GCGAGGAACTGGCGGCGGGCATGTCCGTGCAGCGGGCGATCCATGAAGGCTTCAACCGCGCCTTCACTGCGATCCTCGAC GCCAACCTGACCTCGCTGCTGGTCGGCGGCATCCTTTACGCCATGGGCACCGGCCCGGTGAAGGGCTTCGCCGTGACCAT GTCCCTCGGCATTATCACCTCGATGTTCACGGCCATCCTGGTCACCCGCGCGATGGTCAACCTGATCTTCGGCGGCCGCG ACTTCAAGAAGCTGTGGATCTAA Protein sequence : MLNKYPLWKYLLILAVLAVGFIYSAPNLYPDDPAVQISGASTALQVSQADLDKAGKALADAGIAVKAGSLGKNSGLIRLA RQEDQLPAKDIVRRALGDDYVVALNLAQTTPNWLRNIAAHPMKLGLDLSGGVHFLLEVDMDKAVDARMKVYESEIKSALR KDRVRYRSLPAQDGGIQLGFTEEADLDKAKSLIAKDYRDFEVTQSERTGMQVLRLGMTPAKLAEIREYSIKQNLTTVRNR VNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPDAIRSATETFEFREPRRPPATLERGVIITG DQVTDASASFDENGRPQVNIRLDGHGGELMNRATRNNVGRSMAVVFIEQKPITRYAKQVVDGVEQEVAVPAFKEEKKIIS LATIQSPLGNQFRITGLDAPGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNIAKGIDASLWGMVFVSLFIIVIYRF FGVIATVALAFNMVMLVALMSILGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELAAGMSVQRAIHEGFNRAFTAILD ANLTSLLVGGILYAMGTGPVKGFAVTMSLGIITSMFTAILVTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 82 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 82 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 82 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 82 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 81 |
