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Name : D650_20490 (D650_20490) Accession : YP_007666826.1 Strain : Mannheimia haemolytica USDA-ARS-USMARC-183 Genome accession: NC_020833 Putative virulence/resistance : Unknown Product : Protein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1967342 - 1969183 bp Length : 1842 bp Strand : + Note : preprotein translocase subunit SecD PRK05812; Protein translocase subunit SecD of Bacteria UniRef RepID=SECD_HAEIN DNA sequence : GTGTTAAACCGTTTCCCTCTATGGAAGAATTTAATGGTGATCTTCGTGATCGCCATTGGTGCTTTATATGCCCTTCCAAA TTTATATGGCGATGATCCTTCGGTACAAATTTCCGGTACTCGTGGGCAACAAGCCACACCTGAGACACTGTCTCAAGTGC AATCCACACTTTCAGCAATGAATATTCAGCCGAAATCTGCCGTGTTAGAAAATGGCTCGATTTTGGTTCGTCTCGAAAGC AGCGAACAGCAATTGCCTGCCAAAGAAAAAATCTCAGAAGCATTGGGGAATAACTACTCTGTTGCCTTAAACCTTGCACC AGCAACGCCACAGTGGTTGTCTGACATTGGCGGTAGCCCGATGAAGCGAGGCTTGGACTTGCTTGGCGGTGTTCGTTTCT TAATGGAAGTGGATATGAACACGGCGCTTGCAAAACAACAAGACACTTTGCAAGACAGCCTGCGTAGTGATTTCCGTAAA GAAAAATTGCAATATCAAGCGGTCAAAAAAGGCGAAAATTTTGCAACTGAGGTTGAATTTGCCGATAACGATACCGCCGA AAAAGCAGTGCGTTTAGTGCGTCTCTCTCACCCAACGCTTGATATTTTGGTAAATGATAATAAAGTCACCTTAACGCCAT CAGCACAAGCTCTTTCTGAATCTCGCACGATGGCAATCGAACAAAACCTTTCTATTTTGCGTAAACGTGTTGAGGAATTG GGCGTTTCTGAGCCGACCATTCAGCGTCAAGGTGCAGATCGTATCGTAGTTGAATTACCGGGTGTGCAAGATACCGCTCG TGCCAAAGAGCTTTTAGGGGCAACTGCAACCCTTGAGTTCCGGTTAGTCAATACCGAAGCCAATGTGGCCTCTGCGGCGA AAGGCATTGTGCCGGCTGATTCAGGACTGCAAAACACCCGTGATGGCGAGCCAGTTGTATTACGCCGTAAACCTTCGTTA GGGGGTGAACATATTATTGATGCAACCTCAGGCACTGATGAGCGTGGCTTGCCGCAAGTGAGTATCCGACTCGATACCGA AGGCGGCGAGATGATGGGTGAAATTACTAAAATGGCAATCCAAAAACCGATGGCAACACTTTATACCGAATTTAAAGATT CAGGTCGTAAAGATGCTAACGGTAAAGTCATTTTAGAAAAACACCAAGAGGTAATTAACGTTGCAACCATTCAAACCCGT TTAGGTAATCAATTCCAGATTACAGGGATTAATTCACCAGCGGAAGCTCAAAACCTTGCGGTATTATTACGTTCAGGTGC GTTGATTGCTCCAATCGTGATTGTGGAAGAGCGTACTATCGGTGCTTCTCTTGGGGCAGATAATGTTAAACAAGGTATGG AAGCTAGTATTTTAGGCTTAGGCTTAACGATCCTGTTCTGTCTAGCCTTTTATAAAGTATTTGGTATATTTGCCTCTCTT GCCTTGATTGTGAATATGATCTTAACGATTGGTTTAATGTCATTAATCGGTGCAACCCTTACTATGCCGGGAATTGCCGG TATCGTACTTGCTGTGGGTATGTCAGTTGATGCCAACGTACTAATCTACGAGCGGATCAAAGAAGAGATTCGTAACGGTC GCCCAATTCAACAAGCAATCCACGAAGGTTATAATGGCGCATTCTCAAGTATTTTTGACTCCAACCTCACCACTATTTTG ACTTCTCTTGTGCTTTATGGTGTAGGTACAGGTCCGGTAAAAGGCTTTGCGGTAACGCTTGCATTAGGGGTAATTATTTC TATGTTTACCGCAATTACAGGTACTCGAATGCTTGTAAACTGGGTTTACGGTGGCAAACGCGTGAAGAAACTTTGGATTT AA Protein sequence : MLNRFPLWKNLMVIFVIAIGALYALPNLYGDDPSVQISGTRGQQATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLES SEQQLPAKEKISEALGNNYSVALNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRK EKLQYQAVKKGENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQALSESRTMAIEQNLSILRKRVEEL GVSEPTIQRQGADRIVVELPGVQDTARAKELLGATATLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSL GGEHIIDATSGTDERGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVINVATIQTR LGNQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVKQGMEASILGLGLTILFCLAFYKVFGIFASL ALIVNMILTIGLMSLIGATLTMPGIAGIVLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTIL TSLVLYGVGTGPVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-125 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-125 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-125 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-125 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-125 | 45 |
