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Name : D648_1550 (D648_1550) Accession : YP_007667668.1 Strain : Mannheimia haemolytica USDA-ARS-USMARC-185 Genome accession: NC_020834 Putative virulence/resistance : Virulence Product : Leukotoxin Function : - COG functional category : - COG ID : - EC number : - Position : 149234 - 152095 bp Length : 2862 bp Strand : - Note : Leukotoxin of Proteobacteria UniRef RepID=LKTA_PASTR DNA sequence : ATGGGAACTAGACTTACAACCCTATCAAATGGGCTAAAAAACACTTTAACGGCAACCAAAAGTGGCTTACATAAAGCCGG TCAATCATTAACCCAAGCCGGCAGTTCTTTAAAAACTGGGGCAAAAAAAATTATCCTCTATATTCCCCAAAATTACCAAT ATGATACTGAACAAGGTAATGGTTTACAGGATTTAGTCAAAGCGGCCGAAGAGTTGGGGATTGAGGTACAAAGAGAAGAA CGCAATAATATTGCAACAGCTCAAACCAGTTTAGGCACGATTCAAACCGCTATTGGCTTAACTGAGCGTGGCATTGTGTT ATCCGCTCCACAAATTGATAAATTGCTACAGAAAACTAAAGCAGGCCAAGCATTAGGTTCTGCCGAAAGCATTGTACAAA ATGCAAATAAAGCCAAAACTGTATTATCTGGCATTCAATCTATTTTAGGCTCAGTATTGGCTGGAATGGATTTAGATGAG GCCTTACAGAATAACAGCAACCAACATGCTCTTGCTAAAGCTGGCTTGGAGCTAACAAATTCATTAATTGAAAATATTGC TAATTCAGTAAAAACACTTGACGAATTTGGTGAGCAAATTAGTCAATTTGGTTCAAAACTACAAAATATCAAAGGCTTAG GGACTTTAGGAGACAAACTCAAAAATATCGGTGGACTTGATAAAGCTGGCCTTGGTTTAGATGTTATCTCAGGGCTATTA TCGGGCGCAACAGCTGCACTTGTACTTGCAGATAAAAATGCTTCAACAGCTAAAAAAGTGGGTGCGGGTTTTGAATTGGC AAACCAAGTTGTTGGTAATATTACCAAAGCCGTTTCTTCTTACATTTTAGCCCAACGTGTTGCAGCAGGTTTATCTTCAA CTGGGCCTGTGGCTGCTTTAATTGCTTCTACTGTTTCTCTTGCGATTAGCCCATTAGCATTTGCCGGTATTGCCGATAAA TTTAATCATGCAAAAAGTTTAGAGAGTTATGCCGAACGCTTTAAAAAATTAGGCTATGACGGAGATAATTTATTAGCAGA ATATCAGCGGGGAACAGGGACTATTGATGCATCGGTTACTGCAATTAATACCGCATTGGCCGCTATTGCTGGTGGTGTGT CTGCTGCTGCAGCCGGCTCGGTTATTGCTTCACCGATTGCCTTATTAGTATCTGGGATTACCGGTGTAATTTCTACGATT CTGCAATATTCTAAACAAGCAATGTTTGAGCACGTTGCAAATAAAATTCATAACAAAATTGTAGAATGGGAAAAAAATAA TCACGGTAAGAACTACTTTGAAAATGGTTACGATGCCCGTTATCTTGCGAATTTACAAGATAATATGAAATTCTTACTGA ACTTAAACAAAGAGTTACAGGCAGAACGTGTCATCGCTATTACTCAGCAGCAATGGGATAACAACATTGGTGATTTAGCT GGTATTAGCCGTTTAGGTGAAAAAGTCCTTAGTGGTAAAGCCTATGTGGATGCGTTTGAAGAAGGCAAACACATTAAAGC CGATAAATTAGTACAGTTGGATTCGGCAAACGGTATTATTGATGTGAGTAATTCGGGTAAAGCGAAAACTCAGCATATCT TATTCAGAACGCCATTATTGACGCCGGGAACAGAGCATCGTGAACGCGTACAAACAGGTAAATATGAATATATTACCAAG CTCAATATTAACCGTGTAGATAGCTGGAAAATTACAGATGGTGCAGCAAGTTCTACCTTTGATTTAACTAACGTTGTTCA GCGTATTGGTATTGAATTAGACAATGCTGGAAATGTAACTAAAACCAAAGAAACAAAAATTATTGCCAAACTTGGTGAAG GTGATGACAACGTATTTGTTGGTTCTGGTACGACGGAAATTGATGGCGGTGAAGGTTACGACCGAGTTCACTATAGCCGT GGAAACTATGGTGCTTTAACTATTGATGCAACCAAAGAGACCGAGCAAGGTAGTTATACCGTAAATCGTTTCGTAGAAAC CGGTAAAGCACTACACGAAGTGACTTCAACCCATACCGCATTAGTGGGCAACCGTGAAGAAAAAATAGAATATCGTCATA GCAATAACCAGCACCATGCCGGTTATTACACCAAAGATACCTTGAAAGCTGTTGAAGAAATTATCGGTACATCACATAAC GATATCTTTAAAGGTAGTAAGTTCAATGATGCCTTTAACGGTGGTGATGGTGTCGATACTATTGACGGTAACGACGGCAA TGACCGCTTATTTGGTGGTAAAGGCGATGATATTCTCGATGGTGGAAATGGTGATGATTTTATCGATGGCGGTAAAGGCA ACGACCTATTACACGGTGGCAAGGGCGATGATATTTTCGTTCACCGTAAAGGCGATGGTAATGATATTATTACCGATTCT GACGGCAATGATAAATTATCATTCTCTGATTCGAACTTAAAAGATTTAACATTTGAAAAAGTTAAACATAATCTTGTCAT CACGAATAGCAAAAAAGAGAAAGTGACCATTCAAGACTGGTTCCGAGAGGCTGATTTTGCTAAAGAAGTGCCTAATTATA AAGCAACTAAAGATGAGAAAATCGAAGAAATCATCGGTCAAAATGGCGAGCGGATCACCTCAAAGCAAGTTGATGATCTT ATCGCAAAAGGTAACGGCAAAATTACCCAAGATGAGCTATCAAAAGTTGTTGATAACTATGAATTGCTCAAACATAGCAA AAATGTGACAAACAGCTTAGATAAGTTAATCTCATCTGTAAGTGCATTTACCTCGTCTAATGATTCGAGAAATGTATTAG TGGCTCCAACTTCAATGTTGGATCAAAGTTTATCTTCTCTTCAATTTGCTAGAGCAGCTTAA Protein sequence : MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKIILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREE RNNIATAQTSLGTIQTAIGLTERGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGDKLKNIGGLDKAGLGLDVISGLL SGATAALVLADKNASTAKKVGAGFELANQVVGNITKAVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADK FNHAKSLESYAERFKKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSGITGVISTI LQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMKFLLNLNKELQAERVIAITQQQWDNNIGDLA GISRLGEKVLSGKAYVDAFEEGKHIKADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITK LNINRVDSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTEIDGGEGYDRVHYSR GNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHN DIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDS DGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQDWFREADFAKEVPNYKATKDEKIEEIIGQNGERITSKQVDDL IAKGNGKITQDELSKVVDNYELLKHSKNVTNSLDKLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyA | NP_755445.1 | hemolysin A | Virulence | PAI I CFT073 | Protein | 7e-150 | 47 |
| hlyA | CAD42039.1 | HlyA protein | Virulence | PAI II 536 | Protein | 3e-148 | 46 |
| hlyA | CAD33759.1 | hemolysin A | Virulence | PAI I 536 | Protein | 2e-146 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D648_1550 | YP_007667668.1 | Leukotoxin | VFG0906 | Protein | 3e-150 | 47 |
| D648_1550 | YP_007667668.1 | Leukotoxin | VFG0840 | Protein | 3e-146 | 47 |
| D648_1550 | YP_007667668.1 | Leukotoxin | VFG1558 | Protein | 2e-148 | 46 |
| D648_1550 | YP_007667668.1 | Leukotoxin | VFG1500 | Protein | 9e-147 | 46 |
