Gene Information

Name : D648_23440 (D648_23440)
Accession : YP_007669854.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Virulence
Product : CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2336787 - 2337524 bp
Length : 738 bp
Strand : -
Note : CcmC of Gammaproteobacteria UniRef RepID=C6AJM8_AGGAN

DNA sequence :
ATGTGGAAATGGCTACACCCTTATGCAAAATCGGAAACGCAGTACCATTTGCTAGGGAAAATCCAACCGTTTTTAGGTTG
GCTAAGTTTGATTATGTTAGCGGCTGCTTTTGTTTGGGGCTTGGCTTTTGCCCCGAAAGATTACCAACAGGGCGATAGCT
ATCGCATTATCTTTATTCACGTGCCGGCAGCAATTTGGTCGATGGGCGTATATGGCTCAATGGCGGTGGCAGGCTTGGTG
GCATTGGTTTGGCAAATTCGCCAAGCTAACTTGGCGATGATTTCAATGGCACCTATCGGCTTAGTATTCGCTTTTATTTC
ACTTGCAACCGGTGCAATTTGGGGCAAACCAATGTGGGGGACTTGGTGGGTGTGGGACGCTCGTTTAACCTCCGCTTTAG
TGTTATTTTTCCTTTATATCGGCGTGATGGCTCTTTATTCCGCATTCCAAGACAGACAAACCGGAGCCAAAGCGGCGGCT
GTGCTGTCAGTTGTTGGCGTGATTAACTTGCCGATTATTCACTTTTCGGTGGAATGGTGGAACACCTTGCATCAAGGGGC
GACCATCACTAAATTCGATAAACCGTCTATGGCGGTGGAAATGTTAATTCCGTTGCTATTGGCGATTTTCGGTAGCTTAA
TTTTTACCGCTTGGTTTAGCATTTGGCGTTATCGCATTGCCTTATTAAAGGACGAACGTAATCGCCCTTGGGTAAAACAA
CTGGCAAAATCAGTTTAG

Protein sequence :
MWKWLHPYAKSETQYHLLGKIQPFLGWLSLIMLAAAFVWGLAFAPKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAGLV
ALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDRQTGAKAAA
VLSVVGVINLPIIHFSVEWWNTLHQGATITKFDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLKDERNRPWVKQ
LAKSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-41 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_23440 YP_007669854.1 CcmC VFG1856 Protein 3e-49 49