Gene Information

Name : Clst_2280 (Clst_2280)
Accession : YP_007680321.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Unknown
Product : DNA-binding regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2577161 - 2577889 bp
Length : 729 bp
Strand : -
Note : YebC/PmpR family; COG:0217 Uncharacterized conserved protein

DNA sequence :
ATGTCAGGACATTCGAAATGGGCCAATATCAGACACAAGAAAGAAAAAACCGATGCGCAGAAGGGAAAGATATTTACTAA
ACTGGGCCGGGAAATAGCGATGGCAGTTAAGGCCGGCGGGCCCGATCCCGAAACGAATTCCCGCCTGAAGGATGCAATTG
CAAAGGCGAAAGCCAACAACATGCCTAACGAGAATATAATGAGAAGCATTAAAAAAGCAGCCGGGGATATATCCACCGAT
GATTACGAGGAAATTGTTTATGAGGGCTATGGTCCCGGCGGCGTTGCAATTATTGTGGAAACCCTTACGAACAACCGAAA
CCGCACCGCGGGGGATATAAGACATATTTTTGACAAATACGGCGGAAACCTCGGAACAACCGGATGTGTGTCTTTCATGT
TTGACAAAAGAGGGCAGATTATAATTGAAAAAAACGACAGCATAGACGAAGACAGTCTCATGATGTCTGCGCTCGAAGCC
GGTGCTCTTGATGTGGCTGTTGAGGATGAGTATTATGAAATAATCACCGAGCCGCAGGACTTTTCGAAAGTTGCCGATGC
ACTGGAAAAGGAAGGCTATAAGTTTGAAAGCGCGGAAGTTGCCATGATTCCGAAGACAACAACAACGCTGACCAATGAAG
AAATGATCGCAAACATGGAAAAACTGATAGAAAAGCTTGAAGATCACGATGACGTGCAGAATATTTATCACAACTGGGAA
CAGGGGTAA

Protein sequence :
MSGHSKWANIRHKKEKTDAQKGKIFTKLGREIAMAVKAGGPDPETNSRLKDAIAKAKANNMPNENIMRSIKKAAGDISTD
DYEEIVYEGYGPGGVAIIVETLTNNRNRTAGDIRHIFDKYGGNLGTTGCVSFMFDKRGQIIIEKNDSIDEDSLMMSALEA
GALDVAVEDEYYEIITEPQDFSKVADALEKEGYKFESAEVAMIPKTTTTLTNEEMIANMEKLIEKLEDHDDVQNIYHNWE
QG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1069 YP_853086.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-35 42